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Submitted SNP(ss) Details: ss89558292           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0646566
RefSNP(rs#)rs1538925
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=A|Alt=C|Chr=chr13|Position=28033294|Strand=+|dbSNP=+|Score=81|Reads=3:3:12

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss89558292|allelePos=251|len=501|taxid=9606|alleles='A/C'|mol=Genomic
 TGCATCAAGG CTGCTGGAAC TGGGCTGTAA ACACACCATG TCTGATTGTT GCTTGGGATG
 TGGGTGTCAA GGTTGTAGAT GCCTTGCACC AAACTTCTCT CATTCTTCTA ACTTATATTT
 TCTCGTTGAT GGCAGCCCCC TTACCACGAA TCAGGCTGGA TCCCCATGTG CAGGGAGACT
 AAAGGCTGTC TGACCCACCG CATGAGCCAT CCCCACCCTA CCACTGATGT GAGCACGTTG
 ATCTCTGGCC
 M
 GACATGTACA AAGGCGCTCC CTCTCTTCAG GGTGAGTTGT CCCCTAGCAA GATACTCTAA
 TTTCTCCCCC TTATTAAAAT ATATCCCCTT GTTACAATGT ATATAGAGAT CAAAATACAA
 CATGGTACCC TGTAAATATA CACAATTATT ATTTGCCAAT TTAAAAAATA TAAATTTCAA
 AAATAAAAAA GCCCAAACCA AACAGATATG GTTTGGCTGT GTCCCCACCC AAATCTCATC
 TTGAATTGTA

  Submitted Frequency for ss89558292 back to top
There is no frequency submission for ss89558292.


  dbSNP summary of Genotypes for ss89558292 back to top
No sufficient data to compute Hardy-weinberg probability for ss89558292.


  Submitted individual genotype for ss89558292 back to top
There is no individual genotype data for ss89558292.

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