NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
View SNP Submission Batch
Submitter Handle:HUMANGENOME_JCVI
Submitter Batch ID:1.40
Submitter Method ID:WGS-ASSEMBLY-ATAC-MAPPING
Citation:The diploid genome sequence of an individual human.
Population:J. Craig Venter
Comment:Whole genome shotgun sequencing and assembly was used to identify heterozygous variants. Human genome assembly comparison using ATAC were performed to identify homozygous variants.
Batch Total SubSNP(ss) Count:724


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss95761042 1103649835382 CA/GG 2 rs34057248 0 10 79068 NT_008705.17 69068
ss95761043 1103649835635 AA/GC 2 rs34926441 0 10 239122 NT_008705.17 229122
ss95761044 1103649835934 CCT/GTC 2 rs71199930 0 10 347752 NT_008705.17 337752
ss95761045 1103649835936 CC/GT 2 rs71199931 0 10 347799 NT_008705.17 337799
ss95761046 1103649836025 CA/TG 2 rs71199932 0 10 400989 NT_008705.17 390989
ss95761047 1103649836050 AC/GT 2 rs71199933 0 10 414740 NT_008705.17 404740
ss95761052 1103649836073 CG/TC 2 rs74207113 0 10 417709 NT_008705.17 407709
ss95761051 1103649836072 CA/TT 2 rs74185228 0 10 417772 NT_008705.17 407772
ss95761054 1103649836090 CA/TG 2 rs71199934 0 10 418139 NT_008705.17 408139
ss95761056 1103649836506 CG/TA 2 rs71199935 0 10 679803 NT_008705.17 669803
ss95761057 1103649837016 AA/GT 2 rs67736642 0 10 802118 NT_008705.17 792118
ss95761058 1103649837495 AC/GG 2 rs67401040 0 10 1015591 NT_008705.17 1005591
ss95761059 1103649838201 CT/TG 2 rs71199936 0 10 1326947 NT_008705.17 1316947
ss95761062 1103649838336 AT/TC 2 rs71199937 0 10 1369659 NT_008705.17 1359659
ss95761063 1103649838439 AG/CT 2 rs71199938 0 10 1396899 NT_008705.17 1386899
ss95761067 1103649838871 CA/TG 2 rs71199941 0 10 1547013 NT_008705.17 1537013
ss95761068 1103649838916 AT/CC 2 rs34776750 0 10 1555550 NT_008705.17 1545550
ss95761069 1103649839160 CA/TG 2 rs71199942 0 10 1626325 NT_008705.17 1616325
ss95761070 1103649839206 GT/TC 2 rs71199943 0 10 1641867 NT_008705.17 1631867
ss95761071 1103649839856 CT/GG 2 rs35052808 0 10 1911787 NT_008705.17 1901787
ss95761048 1103649836063 CG/TC 2 N.D. N.D.
ss95761049 1103649836065 CA/TT 2 N.D. N.D.
ss95761050 1103649836068 CA/TG 2 N.D. N.D.
ss95761053 1103649836076 CA/TG 2 N.D. N.D.
ss95761055 1103649836496 CAC/TGT 2 N.D. N.D.
ss95761060 1103649838208 AG/CA 2 N.D. N.D.
ss95761061 1103649838279 CA/TG 2 N.D. N.D.
ss95761064 1103649838553 CC/TA 2 N.D. N.D.
ss95761065 1103649838832 AT/GC 2 rs71199940 0 N.D. N.D.
ss95761066 1103649838837 CA/TG 2 rs74184515 0 N.D. N.D.
30 of 724 subsnp's starting at ss95761042. ss# starting at ss

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement