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    gnrh3 gonadotropin-releasing hormone 3 [ Oryzias latipes (Japanese medaka) ]

    Gene ID: 100049220, updated on 8-Mar-2024

    Summary

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    Gene symbol
    gnrh3
    Gene description
    gonadotropin-releasing hormone 3
    See related
    EnsemblRapid:ENSORLG00000005824
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryzias latipes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
    Also known as
    sgnrh
    Orthologs
    zebrafish all
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    Genomic context

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    See gnrh3 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current ASM223467v1 (GCF_002234675.1) 15 NC_019873.2 (19393131..19394567)
    102 previous assembly ASM31367v1 (GCF_000313675.1) 15 NC_019873.1 (18659062..18660496)

    Chromosome 15 - NC_019873.2Genomic Context describing neighboring genes Neighboring gene protein FAM196A-like Neighboring gene protein tyrosine phosphatase e Neighboring gene O-6-methylguanine-DNA methyltransferase Neighboring gene EBF transcription factor 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Morphological analysis of the early development of telencephalic and diencephalic gonadotropin-releasing hormone neuronal systems in enhanced green fluorescent protein-expressing transgenic medaka lines. Takahashi A, et al. J Comp Neurol, 2016 Mar 1. PMID 26287569
    2. Structural characterization of GnRH loci in the medaka genome. Okubo K, et al. Gene, 2002 Jun 26. PMID 12137956
    3. A novel form of gonadotropin-releasing hormone in the medaka, Oryzias latipes. Okubo K, et al. Biochem Biophys Res Commun, 2000 Sep 16. PMID 11006121
    4. Social rank-dependent expression of gonadotropin-releasing hormones and kisspeptin in the medaka brain. Kagawa N, et al. Gen Comp Endocrinol, 2017 Aug 1. PMID 28279673
    5. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. These results suggest that social hierarchy regulates the expression of GnRH1, GnRH3, and Kiss1 without affecting 11-ketotestosterone level in male medaka.
      Title: Social rank-dependent expression of gonadotropin-releasing hormones and kisspeptin in the medaka brain.
    2. detected several subpopulations of GnRH1 and GnRH3 neurons classified by their projection and distribution patterns using gnrh1:EGFP medaka and gnrh3:EGFP medaka
      Title: Morphological analysis of the early development of telencephalic and diencephalic gonadotropin-releasing hormone neuronal systems in enhanced green fluorescent protein-expressing transgenic medaka lines.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hormone activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    progonadoliberin-3
    Names
    prepro-gonadotropin-releasing hormone
    progonadoliberin III
    salmon-type gonadotropin-releasing hormone

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001104672.1 → NP_001098142.1  progonadoliberin-3 precursor

      See identical proteins and their annotated locations for NP_001098142.1

      Status: VALIDATED

      Source sequence(s)
      AB041332
      UniProtKB/Swiss-Prot
      Q8JIQ3, Q9DD49
      UniProtKB/TrEMBL
      A0A3P9M0A1, H2LMQ4, Q76K53
      Related
      ENSORLP00000007327.2, ENSORLT00000007328.3

    RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM223467v1 Primary Assembly

    Genomic

    1. NC_019873.2 Reference ASM223467v1 Primary Assembly

      Range
      19393131..19394567
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9DD49.1 GenPept UniProtKB/Swiss-Prot:Q9DD49

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases