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    im:7142016 im:7142016 [ Danio rerio (zebrafish) ]

    Gene ID: 101885922, updated on 27-Mar-2024

    Summary

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    Official Symbol
    im:7142016provided by ZNC
    Official Full Name
    im:7142016provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050411-42
    See related
    Ensembl:ENSDARG00000034598 AllianceGenome:ZFIN:ZDB-GENE-050411-42
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    dicp1.22; dicp1.23
    Summary
    Is expressed in midbrain hindbrain boundary. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See im:7142016 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) Unplaced Scaffold NW_003336703.1 (3870..23524, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) Unplaced Scaffold NW_003336703.1 (3815..47179, complement)

    NW_003336703.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110438447 Neighboring gene GTPase IMAP family member 4-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Genomic and functional characterization of the diverse immunoglobulin domain-containing protein (DICP) family. Haire RN, et al. Genomics, 2012 May. PMID 22386706, Free PMC Article
    2. The identification of additional zebrafish DICP genes reveals haplotype variation and linkage to MHC class I genes. Rodriguez-Nunez I, et al. Immunogenetics, 2016 Apr. PMID 26801775, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein im:7142016

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NW_003336703.1 Reference GRCz11 Primary Assembly

      Range
      3870..23524 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021470908.1 → XP_021326583.1  uncharacterized protein im:7142016

      UniProtKB/TrEMBL
      A0A8M9PHW4
      Related
      ENSDARP00000156134.1, ENSDART00000189589.1
      Conserved Domains (1) summary
      smart00410
      Location:33 → 106
      IG_like; Immunoglobulin like
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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