U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    NR4A1 nuclear receptor subfamily 4 group A member 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 451913, updated on 3-Apr-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    NR4A1provided by VGNC
    Official Full Name
    nuclear receptor subfamily 4 group A member 1provided by VGNC
    Primary source
    VGNC:VGNC:5507
    Locus tag
    CK820_G0039616
    See related
    Ensembl:ENSPTRG00000004966
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See NR4A1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 10 NC_072408.2 (43814947..43851668, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 12 NC_072410.1 (42488760..42510975, complement)

    Chromosome 10 - NC_072408.2Genomic Context describing neighboring genes Neighboring gene olfactory receptor 7E24-like Neighboring gene small integral membrane protein 41 Neighboring gene autophagy related 101 Neighboring gene trafficking regulator and scaffold protein tamalin Neighboring gene U6 spliceosomal RNA Neighboring gene activin A receptor type 1B

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

    Go to the top of the page

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear glucocorticoid receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to corticotropin-releasing hormone stimulus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    nuclear receptor subfamily 4 group A member 1; nuclear receptor subfamily 4immunitygroup A member 1
    Names
    orphan nuclear receptor NR4A1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072408.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      43814947..43851668 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063786659.1 → XP_063642729.1  nuclear receptor subfamily 4immunitygroup A member 1 isoform X3

      UniProtKB/TrEMBL
      A0A2J8KDI6, A0A803KI99, K7D0Y5

    2. XM_009425363.4 → XP_009423638.1  nuclear receptor subfamily 4immunitygroup A member 1 isoform X6

      UniProtKB/TrEMBL
      A0A2J8KDJ3
      Conserved Domains (2) summary
      cl02596
      Location:337 → 364
      NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
      cl11397
      Location:362 → 576
      NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

    3. XM_009425361.4 → XP_009423636.1  nuclear receptor subfamily 4immunitygroup A member 1 isoform X1

      UniProtKB/TrEMBL
      A0A2I3RBZ8
      Conserved Domains (2) summary
      cd07348
      Location:433 → 670
      NR_LBD_NGFI-B; The ligand binding domain of Nurr1, a member of conserved family of nuclear receptors
      cd06969
      Location:337 → 411
      NR_DBD_NGFI-B; DNA-binding domain of the orphan nuclear receptor, nerve growth factor-induced-B

    4. XM_003313691.6 → XP_003313739.1  nuclear receptor subfamily 4immunitygroup A member 1 isoform X2

      UniProtKB/TrEMBL
      A0A2I3RBZ8, A0A2J8KDI5, A0A6D2WB54, H2QZT3
      Related
      ENSPTRP00000039485.4
      Conserved Domains (2) summary
      cd07348
      Location:415 → 652
      NR_LBD_NGFI-B; The ligand binding domain of Nurr1, a member of conserved family of nuclear receptors
      cd06969
      Location:319 → 393
      NR_DBD_NGFI-B; DNA-binding domain of the orphan nuclear receptor, nerve growth factor-induced-B

    5. XM_003952188.6 → XP_003952237.1  nuclear receptor subfamily 4immunitygroup A member 1 isoform X5

      See identical proteins and their annotated locations for XP_003952237.1

      UniProtKB/TrEMBL
      A0A2J8KDI8, A0A803KLC9, G2HHP1, K7BQ21
      Conserved Domains (2) summary
      cd07348
      Location:361 → 598
      NR_LBD_NGFI-B; The ligand binding domain of Nurr1, a member of conserved family of nuclear receptors
      cd06969
      Location:265 → 339
      NR_DBD_NGFI-B; DNA-binding domain of the orphan nuclear receptor, nerve growth factor-induced-B

    6. XM_003313689.6 → XP_003313737.1  nuclear receptor subfamily 4immunitygroup A member 1 isoform X5

      See identical proteins and their annotated locations for XP_003313737.1

      UniProtKB/TrEMBL
      A0A2J8KDI8, A0A803KLC9, G2HHP1, K7BQ21
      Related
      ENSPTRP00000062138.1
      Conserved Domains (2) summary
      cd07348
      Location:361 → 598
      NR_LBD_NGFI-B; The ligand binding domain of Nurr1, a member of conserved family of nuclear receptors
      cd06969
      Location:265 → 339
      NR_DBD_NGFI-B; DNA-binding domain of the orphan nuclear receptor, nerve growth factor-induced-B

    7. XM_009425362.5 → XP_009423637.1  nuclear receptor subfamily 4immunitygroup A member 1 isoform X4

      UniProtKB/TrEMBL
      G2HHP1
      Conserved Domains (2) summary
      cd07348
      Location:365 → 602
      NR_LBD_NGFI-B; The ligand binding domain of Nurr1, a member of conserved family of nuclear receptors
      cd06969
      Location:269 → 343
      NR_DBD_NGFI-B; DNA-binding domain of the orphan nuclear receptor, nerve growth factor-induced-B

    8. XM_063786660.1 → XP_063642730.1  nuclear receptor subfamily 4immunitygroup A member 1 isoform X5

      UniProtKB/TrEMBL
      A0A2J8KDI8, A0A803KLC9, K7BQ21
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Miscellaneous