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    LOC585087 serum amyloid A-5 protein [ Strongylocentrotus purpuratus (purple sea urchin) ]

    Gene ID: 585087, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC585087
    Gene description
    serum amyloid A-5 protein
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Strongylocentrotus purpuratus
    Lineage
    Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145596.1 (31899838..31901700, complement)
    Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003577371.1 (59908..66447, complement)

    NW_022145596.1Genomic Context describing neighboring genes Neighboring gene putative nuclease HARBI1 Neighboring gene uncharacterized protein K02A2.6-like Neighboring gene slit homolog 3 protein-like Neighboring gene DNA repair protein RAD50

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serum amyloid A-5 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Spur_5.0 Primary Assembly

    Genomic

    1. NW_022145596.1 Reference Spur_5.0 Primary Assembly

      Range
      31899838..31901700 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011681519.2 → XP_011679821.1  serum amyloid A-5 protein

      UniProtKB/TrEMBL
      A0A7M7HPP4
      Conserved Domains (1) summary
      pfam00277
      Location:37 → 137
      SAA; Serum amyloid A protein
    Nucleotide Protein
    Heading Accession and Version

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