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ASM382977v1

Organism name:
Junco hyemalis (dark-eyed junco)
Infraspecific name:
Ecotype: carolinensis
BioSample:
SAMN10120167
BioProject:
PRJNA493001
Submitter:
National Museum of Natural Sciences
Date:
2018/11/26
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_003829775.1 (replaced)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
QZWM01
Assembly method:
HiRise v. JUN-2017
Expected final version:
yes
Genome coverage:
233.0x
Sequencing technology:
Illumina HiSeq

IDs: 2117111 [UID] 7922788 [GenBank]

See Genome Information for Junco hyemalis

History (Show revision history)

Comment

Global statistics

Total sequence length958,315,288
Total ungapped length926,976,521
Gaps between scaffolds0
Number of scaffolds4,457
Scaffold N5071,317,294
Scaffold L505
Number of contigs48,637
Contig N5080,164
Contig L503,083
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)4,457

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced958,315,2884,457926,976,52171,317,29444,1800