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aopep aminopeptidase O (putative) [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100145347, updated on 25-Apr-2024

Summary

Official Symbol
aopepprovided by Xenbase
Official Full Name
aminopeptidase O (putative)provided by Xenbase
Primary source
Xenbase:XB-GENE-986050
See related
Ensembl:ENSXETG00000017591
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
apo; ap-o; c9orf3
Orthologs
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Genomic context

Location:
chromosome: 1
Exon count:
18
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (135462013..135661972)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (123266883..123462006)

Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene fructose-bisphosphatase 2 Neighboring gene fructose-bisphosphatase 1 Neighboring gene microRNA mir-23b Neighboring gene microRNA mir-27b

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables aminopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables metalloaminopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    135462013..135661972
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031890955.1XP_031746815.1  aminopeptidase O isoform X2

    UniProtKB/TrEMBL
    A0A8J1IPY9, F6XZB8
    Conserved Domains (1) summary
    cl14813
    Location:233652
    GluZincin; Gluzincin Peptidase family (thermolysin-like proteinases, TLPs) which includes peptidases M1, M2, M3, M4, M13, M32 and M36 (fungalysins)
  2. XM_018089437.2XP_017944926.1  aminopeptidase O isoform X3

    UniProtKB/TrEMBL
    A0A8J0SZ72, F6XZB8
  3. XM_012971565.3XP_012827019.1  aminopeptidase O isoform X1

    See identical proteins and their annotated locations for XP_012827019.1

    UniProtKB/TrEMBL
    A0A6I8SC96, F6XZB8
    Related
    ENSXETP00000094614.1, ENSXETT00000078869.2
    Conserved Domains (2) summary
    pfam09127
    Location:731821
    Leuk-A4-hydro_C; Leukotriene A4 hydrolase, C-terminal
    cl14813
    Location:233652
    GluZincin; Gluzincin Peptidase family (thermolysin-like proteinases, TLPs) which includes peptidases M1, M2, M3, M4, M13, M32 and M36 (fungalysins)
  4. XM_012971569.3XP_012827023.1  aminopeptidase O isoform X1

    See identical proteins and their annotated locations for XP_012827023.1

    UniProtKB/TrEMBL
    A0A6I8SC96, F6XZB8
    Conserved Domains (2) summary
    pfam09127
    Location:731821
    Leuk-A4-hydro_C; Leukotriene A4 hydrolase, C-terminal
    cl14813
    Location:233652
    GluZincin; Gluzincin Peptidase family (thermolysin-like proteinases, TLPs) which includes peptidases M1, M2, M3, M4, M13, M32 and M36 (fungalysins)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001126819.2: Suppressed sequence

    Description
    NM_001126819.2: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from cow: C8H9orf3 (GeneID:531757).