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rsad2 radical S-adenosyl methionine domain containing 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100493449, updated on 25-Apr-2024

Summary

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Official Symbol
rsad2provided by Xenbase
Official Full Name
radical S-adenosyl methionine domain containing 2provided by Xenbase
Primary source
Xenbase:XB-GENE-485892
See related
Ensembl:ENSXETG00000023435
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (136737770..136745017)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (132709668..132716289)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene SRY-box 11 Neighboring gene ring finger protein 144A Neighboring gene cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial Neighboring gene uncharacterized LOC105947346

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
  
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within defense response to virus IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within innate immune response IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
  
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
  
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
radical S-adenosyl methionine domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    136737770..136745017
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002935027.4 → XP_002935073.2  radical S-adenosyl methionine domain-containing protein 2

    UniProtKB/TrEMBL
    A0A6I8PM51
    Related
    ENSXETP00000055855.2, ENSXETT00000055855.3
    Conserved Domains (1) summary
    TIGR04278
    Location:55 → 393
    viperin; antiviral radical SAM protein viperin
Nucleotide Protein Strain
Heading Accession and Version

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