U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TMPRSS13 transmembrane serine protease 13 [ Microcaecilia unicolor ]

Gene ID: 115481360, updated on 17-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TMPRSS13
Gene description
transmembrane serine protease 13
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TMPRSS13 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
14
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 12 NC_044042.1 (49321319..49425131, complement)

Chromosome 12 - NC_044042.1Genomic Context describing neighboring genes Neighboring gene DS cell adhesion molecule like 1 Neighboring gene uncharacterized LOC115482152 Neighboring gene transmembrane protease serine 4-like Neighboring gene interleukin 10 receptor subunit alpha Neighboring gene small integral membrane protein 35 Neighboring gene uncharacterized LOC115482154 Neighboring gene uncharacterized LOC115482284

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_044042.1 Chromosome 12 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transmembrane protease serine 13

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044042.1 Reference aMicUni1.1 Primary Assembly

    Range
    49321319..49425131 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030220433.1 → XP_030076293.1  transmembrane protease serine 13 isoform X1

    UniProtKB/TrEMBL
    A0A6P7ZET6
    Conserved Domains (2) summary
    smart00020
    Location:243 → 477
    Tryp_SPc; Trypsin-like serine protease
    pfam15494
    Location:147 → 239
    SRCR_2; Scavenger receptor cysteine-rich domain

  2. XM_030220434.1 → XP_030076294.1  transmembrane protease serine 13 isoform X2

    UniProtKB/TrEMBL
    A0A6P7ZPZ5
    Conserved Domains (2) summary
    smart00020
    Location:236 → 470
    Tryp_SPc; Trypsin-like serine protease
    pfam15494
    Location:140 → 232
    SRCR_2; Scavenger receptor cysteine-rich domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.