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LOC119872414 small nucleolar RNA SNORD45 [ Canis lupus familiaris (dog) ]

Gene ID: 119872414, updated on 23-Dec-2021

Summary

Gene symbol
LOC119872414
Gene description
small nucleolar RNA SNORD45
See related
Ensembl:ENSCAFG00845010234
Gene type
snoRNA
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
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Genomic context

See LOC119872414 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (28595228..28595296)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (29795515..29795583)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (28694191..28694259)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (28398359..28398427)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (28288486..28288554)

Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene MPV17 mitochondrial inner membrane protein like Neighboring gene uncharacterized LOC111096298 Neighboring gene pyridoxal dependent decarboxylase domain containing 1 Neighboring gene N-terminal asparagine amidase Neighboring gene uncharacterized LOC111096299 Neighboring gene RRN3 homolog, RNA polymerase I transcription factor

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051810.1 Reference ROS_Cfam_1.0

    Range
    28595228..28595296
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005429250.1 RNA Sequence

    Related
    ENSCAFT00845018005.1

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049266.1 Alternate UMICH_Zoey_3.1

    Range
    28398359..28398427
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005327864.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

    Range
    28288486..28288554
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005396019.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

    Range
    28694191..28694259
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005361504.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    29795515..29795583
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005370546.1 RNA Sequence