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T28F3.9 Glycosyltransferase family 92 protein [ Caenorhabditis elegans ]

Gene ID: 189057, updated on 19-Jun-2024

Summary

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Gene symbol
T28F3.9
Gene description
Glycosyltransferase family 92 protein
Locus tag
CELE_T28F3.9
See related
AllianceGenome:WB:WBGene00012135
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable glycosyltransferase activity. Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in cataract and cataract 13 with adult i phenotype. Orthologous to several human genes including GCNT1 (glucosaminyl (N-acetyl) transferase 1); GCNT2 (glucosaminyl (N-acetyl) transferase 2 (I blood group)); and GCNT3 (glucosaminyl (N-acetyl) transferase 3, mucin type). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See T28F3.9 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
10
Sequence:
Chromosome: IV; NC_003282.8 (17308511..17311766)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene EGF-like domain-containing protein Neighboring gene ncRNA Neighboring gene Sodium-dependent nutrient amino acid transporter 1 Neighboring gene TMhelix containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Glycosyltransferase family 92 protein
NP_503076.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    17308511..17311766
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_070675.2 → NP_503076.1  Glycosyltransferase family 92 protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503076.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EBQ5
    Conserved Domains (1) summary
    pfam02485
    Location:170 → 435
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
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