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CG13084 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 35229, updated on 10-May-2024

Summary

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Official Symbol
CG13084provided by FlyBase
Primary source
FLYBASE:FBgn0032788
Locus tag
Dmel_CG13084
See related
AllianceGenome:FB:FBgn0032788
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG13084
Summary
Located in egg chorion. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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See CG13084 in Genome Data Viewer
Location:
37E3-37E4; 2-54 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (19484930..19486532)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (19484930..19486532)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43839 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Cytosolic thiouridylase subunit 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of a mitochondrial target of thiazolidinedione insulin sensitizers (mTOT)--relationship to newly identified mitochondrial pyruvate carrier proteins. Colca JR, et al. PLoS One, 2013. PMID 23690925, Free PMC Article
  2. Minor proteins and enzymes of the Drosophila eggshell matrix. Fakhouri M, et al. Dev Biol, 2006 May 1. PMID 16515779, Free PMC Article
  3. Differential gene expression related to Nora virus infection of Drosophila melanogaster. Cordes EJ, et al. Virus Res, 2013 Aug. PMID 23603562, Free PMC Article
  4. Genomic profiling and expression studies reveal both positive and negative activities for the Drosophila Myb MuvB/dREAM complex in proliferating cells. Georlette D, et al. Genes Dev, 2007 Nov 15. PMID 17978103, Free PMC Article
  5. Post-mating gene expression profiles of female Drosophila melanogaster in response to time and to four male accessory gland proteins. McGraw LA, et al. Genetics, 2008 Jul. PMID 18562649, Free PMC Article

See all (26) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
located_in egg chorion IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
Names
CG13084-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    19484930..19486532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_136127.2 → NP_609971.1  uncharacterized protein Dmel_CG13084 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609971.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A9UNF6, Q9VIV8
    Related
    FBpp0080781
    Conserved Domains (2) summary
    PRK10263
    Location:260 → 445
    PRK10263; DNA translocase FtsK; Provisional
    TIGR02168
    Location:23 → 255
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VIV8 Q9VIV8

Gene LinkOut

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