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SSTR1 somatostatin receptor 1 [ Canis lupus familiaris (dog) ]

Gene ID: 403455, updated on 5-Mar-2024

Summary

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Official Symbol
SSTR1provided by VGNC
Official Full Name
somatostatin receptor 1provided by VGNC
Primary source
VGNC:VGNC:46843
See related
Ensembl:ENSCAFG00845003155
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See SSTR1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 8 NC_051812.1 (16688125..16691797)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 8 NC_006590.4 (16377472..16378647)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 8 NC_049229.1 (16740560..16741735)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 8 NC_049268.1 (16381728..16382903)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 8 NC_049749.1 (16439948..16441123)

Chromosome 8 - NC_051812.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat domain 6 Neighboring gene prefoldin subunit 1 pseudogene Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene C-type lectin domain containing 14A Neighboring gene uncharacterized LOC119872849

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables neuropeptide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables somatostatin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to estradiol stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuropeptide signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
somatostatin receptor type 1
Names
SS-1-R
SS1-R
SS1R

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031816.1 → NP_001026986.1  somatostatin receptor type 1

    See identical proteins and their annotated locations for NP_001026986.1

    Status: PROVISIONAL

    Source sequence(s)
    AY702069
    UniProtKB/Swiss-Prot
    Q49LX5
    UniProtKB/TrEMBL
    A0A8C0LGF6
    Related
    ENSCAFP00845004397.1, ENSCAFT00845005541.1
    Conserved Domains (1) summary
    cd15970
    Location:58 → 333
    7tmA_SSTR1; somatostatin receptor type 1, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051812.1 Reference ROS_Cfam_1.0

    Range
    16688125..16691797
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038672835.1 → XP_038528763.1  somatostatin receptor type 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0M047, A0A8I3MMW3
    Conserved Domains (1) summary
    cd15970
    Location:58 → 333
    7tmA_SSTR1; somatostatin receptor type 1, member of the class A family of seven-transmembrane G protein-coupled receptors

  2. XM_038672836.1 → XP_038528764.1  somatostatin receptor type 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0M047, A0A8I3MMW3
    Conserved Domains (1) summary
    cd15970
    Location:58 → 333
    7tmA_SSTR1; somatostatin receptor type 1, member of the class A family of seven-transmembrane G protein-coupled receptors

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049268.1 Alternate UMICH_Zoey_3.1

    Range
    16381728..16382903
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049749.1 Alternate UNSW_CanFamBas_1.0

    Range
    16439948..16441123
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049229.1 Alternate UU_Cfam_GSD_1.0

    Range
    16740560..16741735
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    16377472..16378647
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q49LX5.1 GenPept UniProtKB/Swiss-Prot:Q49LX5

Gene LinkOut

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