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SCARA3 scavenger receptor class A member 3 [ Pan troglodytes (chimpanzee) ]

Gene ID: 464076, updated on 29-Mar-2024

Summary

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Official Symbol
SCARA3provided by VGNC
Official Full Name
scavenger receptor class A member 3provided by VGNC
Primary source
VGNC:VGNC:6573
Locus tag
CK820_G0013305
See related
Ensembl:ENSPTRG00000020108
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See SCARA3 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 7 NC_072405.2 (35979289..36057479)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 8 NC_072406.1 (39555337..39619920)

Chromosome 7 - NC_072405.2Genomic Context describing neighboring genes Neighboring gene epoxide hydrolase 2 Neighboring gene clusterin Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC107976271 Neighboring gene small nucleolar RNA U13 Neighboring gene coiled-coil domain containing 25 Neighboring gene U6 spliceosomal RNA Neighboring gene establishment of sister chromatid cohesion N-acetyltransferase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
scavenger receptor class A member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072405.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    35979289..36057479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016959268.3 → XP_016814757.3  scavenger receptor class A member 3 isoform X2

  2. XM_003311686.6 → XP_003311734.1  scavenger receptor class A member 3 isoform X3

    See identical proteins and their annotated locations for XP_003311734.1

    UniProtKB/TrEMBL
    A0A2J8N8J5, A0A6D2XRX5, H2QVY2
    Related
    ENSPTRP00000034425.2
    Conserved Domains (1) summary
    cl25732
    Location:128 → 374
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_009455082.5 → XP_009453357.3  scavenger receptor class A member 3 isoform X1

    UniProtKB/TrEMBL
    A0A2J8N8L0, A0A803KK62, K7D8J2
    Conserved Domains (2) summary
    pfam01391
    Location:475 → 541
    Collagen; Collagen triple helix repeat (20 copies)
    cl25732
    Location:121 → 374
    SMC_N; RecF/RecN/SMC N terminal domain

RNA

  1. XR_001720108.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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