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LIMS1 LIM zinc finger domain containing 1 [ Canis lupus familiaris (dog) ]

Gene ID: 474540, updated on 5-Mar-2024

Summary

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Official Symbol
LIMS1provided by VGNC
Official Full Name
LIM zinc finger domain containing 1provided by VGNC
Primary source
VGNC:VGNC:111550
See related
Ensembl:ENSCAFG00845008233
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
LIMS3; LIMS3L
Orthologs
human mouse all
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Genomic context

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See LIMS1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
16
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (36045342..36192076, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (35115177..35261730, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (36249779..36396408, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (35774284..35920701, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (36057448..36204222, complement)

Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene RAN binding protein 2 Neighboring gene 39S ribosomal protein L40, mitochondrial-like Neighboring gene small nucleolar RNA SNORA42/SNORA80 family Neighboring gene non-histone chromosomal protein HMG-17-like Neighboring gene GPN-loop GTPase 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of substrate adhesion-dependent cell spreading IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LIM and senescent cell antigen-like-containing domain protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051814.1 Reference ROS_Cfam_1.0

    Range
    36045342..36192076 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038680142.1 → XP_038536070.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8C0PAG7, A0A8C0PJ35, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:22 → 80
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:83 → 134
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:147 → 197
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:203 → 256
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:264 → 317
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  2. XM_038680145.1 → XP_038536073.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0PJ35, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  3. XM_038680143.1 → XP_038536071.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0PJ35, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  4. XM_038680140.1 → XP_038536068.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0PDK7, A0A8C0PJ35, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:47 → 105
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:108 → 159
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:172 → 222
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:228 → 281
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:289 → 342
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  5. XM_038680141.1 → XP_038536069.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0PJ35, A0A8C0SNU6, A0A8I3N639, A0A8I3RVY6
    Related
    ENSCAFP00845011274.1, ENSCAFT00845014554.1
    Conserved Domains (5) summary
    cd09331
    Location:47 → 105
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:108 → 159
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:172 → 222
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:228 → 281
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:289 → 342
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  6. XM_038680146.1 → XP_038536074.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0PJ35, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  7. XM_038680144.1 → XP_038536072.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0PJ35, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  8. XM_038680137.1 → XP_038536065.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0YZ34, A0A8I3MXQ5
    Related
    ENSCAFP00845011429.1, ENSCAFT00845014748.1
    Conserved Domains (5) summary
    cd09331
    Location:72 → 130
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:133 → 184
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:197 → 247
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:253 → 306
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:314 → 367
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  9. XM_038680139.1 → XP_038536067.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0PJ35, A0A8C0SQL4, A0A8I3N8H0, A0A8I3RVY6
    Related
    ENSCAFP00845011316.1, ENSCAFT00845014603.1
    Conserved Domains (5) summary
    cd09331
    Location:72 → 130
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:133 → 184
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:197 → 247
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:253 → 306
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:314 → 367
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  10. XM_038680138.1 → XP_038536066.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0YZ34, A0A8I3MXQ5
    Conserved Domains (5) summary
    cd09331
    Location:72 → 130
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:133 → 184
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:197 → 247
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:253 → 306
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:314 → 367
    LIM5_PINCH; The fifth LIM domain of protein PINCH

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049270.1 Alternate UMICH_Zoey_3.1

    Range
    35774284..35920701 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038488891.1 → XP_038344819.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X5

    Conserved Domains (5) summary
    cd09331
    Location:22 → 80
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:83 → 134
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:147 → 197
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:203 → 256
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:264 → 317
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  2. XM_038488894.1 → XP_038344822.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  3. XM_038488892.1 → XP_038344820.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  4. XM_038488889.1 → XP_038344817.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X3

    Conserved Domains (5) summary
    cd09331
    Location:47 → 105
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:108 → 159
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:172 → 222
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:228 → 281
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:289 → 342
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  5. XM_038488890.1 → XP_038344818.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X4

    Conserved Domains (5) summary
    cd09331
    Location:47 → 105
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:108 → 159
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:172 → 222
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:228 → 281
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:289 → 342
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  6. XM_038488895.1 → XP_038344823.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  7. XM_038488893.1 → XP_038344821.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  8. XM_038488886.1 → XP_038344814.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X1

    Conserved Domains (5) summary
    cd09331
    Location:72 → 130
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:133 → 184
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:197 → 247
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:253 → 306
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:314 → 367
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  9. XM_038488888.1 → XP_038344816.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X2

    Conserved Domains (5) summary
    cd09331
    Location:72 → 130
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:133 → 184
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:197 → 247
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:253 → 306
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:314 → 367
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  10. XM_038488887.1 → XP_038344815.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X1

    Conserved Domains (5) summary
    cd09331
    Location:72 → 130
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:133 → 184
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:197 → 247
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:253 → 306
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:314 → 367
    LIM5_PINCH; The fifth LIM domain of protein PINCH

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

    Range
    36057448..36204222 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038614774.1 → XP_038470702.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X4

    Conserved Domains (5) summary
    cd09331
    Location:47 → 105
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:108 → 159
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:172 → 222
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:228 → 281
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:289 → 342
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  2. XM_038614772.1 → XP_038470700.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X2

    Conserved Domains (5) summary
    cd09331
    Location:72 → 130
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:133 → 184
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:197 → 247
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:253 → 306
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:314 → 367
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  3. XM_038614775.1 → XP_038470703.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X5

    Conserved Domains (5) summary
    cd09331
    Location:22 → 80
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:83 → 134
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:147 → 197
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:203 → 256
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:264 → 317
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  4. XM_038614778.1 → XP_038470706.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  5. XM_038614776.1 → XP_038470704.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  6. XM_038614773.1 → XP_038470701.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X3

    Conserved Domains (5) summary
    cd09331
    Location:47 → 105
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:108 → 159
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:172 → 222
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:228 → 281
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:289 → 342
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  7. XM_038614779.1 → XP_038470707.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  8. XM_038614777.1 → XP_038470705.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  9. XM_038614770.1 → XP_038470698.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X1

    Conserved Domains (5) summary
    cd09331
    Location:72 → 130
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:133 → 184
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:197 → 247
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:253 → 306
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:314 → 367
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  10. XM_038614771.1 → XP_038470699.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X1

    Conserved Domains (5) summary
    cd09331
    Location:72 → 130
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:133 → 184
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:197 → 247
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:253 → 306
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:314 → 367
    LIM5_PINCH; The fifth LIM domain of protein PINCH

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

    Range
    36249779..36396408 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038550854.1 → XP_038406782.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0PJ35, A0A8C0SNU6, A0A8I3N639, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:47 → 105
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:108 → 159
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:172 → 222
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:228 → 281
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:289 → 342
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  2. XM_038550852.1 → XP_038406780.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0PJ35, A0A8C0SQL4, A0A8I3N8H0, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:72 → 130
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:133 → 184
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:197 → 247
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:253 → 306
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:314 → 367
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  3. XM_038550855.1 → XP_038406783.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8C0PAG7, A0A8C0PJ35, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:22 → 80
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:83 → 134
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:147 → 197
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:203 → 256
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:264 → 317
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  4. XM_038550858.1 → XP_038406786.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0PJ35, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  5. XM_038550856.1 → XP_038406784.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0PJ35, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  6. XM_038550853.1 → XP_038406781.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0PDK7, A0A8C0PJ35, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:47 → 105
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:108 → 159
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:172 → 222
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:228 → 281
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:289 → 342
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  7. XM_038550859.1 → XP_038406787.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0PJ35, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  8. XM_038550857.1 → XP_038406785.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0PJ35, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  9. XM_038550850.1 → XP_038406778.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0YZ34, A0A8I3MXQ5
    Conserved Domains (5) summary
    cd09331
    Location:72 → 130
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:133 → 184
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:197 → 247
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:253 → 306
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:314 → 367
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  10. XM_038550851.1 → XP_038406779.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0YZ34, A0A8I3MXQ5
    Conserved Domains (5) summary
    cd09331
    Location:72 → 130
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:133 → 184
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:197 → 247
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:253 → 306
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:314 → 367
    LIM5_PINCH; The fifth LIM domain of protein PINCH

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    35115177..35261730 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003431515.5 → XP_003431563.2  LIM and senescent cell antigen-like-containing domain protein 1 isoform X4

    See identical proteins and their annotated locations for XP_003431563.2

    UniProtKB/TrEMBL
    A0A8C0PJ35, A0A8C0SNU6, A0A8I3N639, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:47 → 105
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:108 → 159
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:172 → 222
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:228 → 281
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:289 → 342
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  2. XM_857845.6 → XP_862938.3  LIM and senescent cell antigen-like-containing domain protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0PJ35, A0A8C0SQL4, A0A8I3N8H0, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:72 → 130
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:133 → 184
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:197 → 247
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:253 → 306
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:314 → 367
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  3. XM_003431514.4 → XP_003431562.2  LIM and senescent cell antigen-like-containing domain protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8C0PAG7, A0A8C0PJ35, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:22 → 80
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:83 → 134
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:147 → 197
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:203 → 256
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:264 → 317
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  4. XM_005625982.4 → XP_005626039.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    See identical proteins and their annotated locations for XP_005626039.1

    UniProtKB/TrEMBL
    A0A8C0PJ35, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  5. XM_005625980.4 → XP_005626037.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    See identical proteins and their annotated locations for XP_005626037.1

    UniProtKB/TrEMBL
    A0A8C0PJ35, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  6. XM_005625979.4 → XP_005626036.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0PDK7, A0A8C0PJ35, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:47 → 105
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:108 → 159
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:172 → 222
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:228 → 281
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:289 → 342
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  7. XM_022424540.2 → XP_022280248.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0PJ35, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  8. XM_005625981.4 → XP_005626038.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X6

    See identical proteins and their annotated locations for XP_005626038.1

    UniProtKB/TrEMBL
    A0A8C0PJ35, A0A8I3RVY6
    Conserved Domains (5) summary
    cd09331
    Location:10 → 68
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:71 → 122
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:135 → 185
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:191 → 244
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:252 → 305
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  9. XM_005625978.4 → XP_005626035.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0YZ34, A0A8I3MXQ5
    Conserved Domains (5) summary
    cd09331
    Location:72 → 130
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:133 → 184
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:197 → 247
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:253 → 306
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:314 → 367
    LIM5_PINCH; The fifth LIM domain of protein PINCH

  10. XM_038643162.1 → XP_038499090.1  LIM and senescent cell antigen-like-containing domain protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0YZ34, A0A8I3MXQ5
    Conserved Domains (5) summary
    cd09331
    Location:72 → 130
    LIM1_PINCH; The first LIM domain of protein PINCH
    cd09332
    Location:133 → 184
    LIM2_PINCH; The second LIM domain of protein PINCH
    cd09333
    Location:197 → 247
    LIM3_PINCH; The third LIM domain of protein PINCH
    cd09334
    Location:253 → 306
    LIM4_PINCH; The fourth LIM domain of protein PINCH
    cd09335
    Location:314 → 367
    LIM5_PINCH; The fifth LIM domain of protein PINCH
Nucleotide Protein
Heading Accession and Version

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