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PDZK1IP1 PDZK1 interacting protein 1 [ Canis lupus familiaris (dog) ]

Gene ID: 475365, updated on 5-Mar-2024

Summary

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Official Symbol
PDZK1IP1provided by VGNC
Official Full Name
PDZK1 interacting protein 1provided by VGNC
Primary source
VGNC:VGNC:44404
See related
Ensembl:ENSCAFG00845016726
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See PDZK1IP1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 15 NC_051819.1 (13629015..13635434)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 15 NC_006597.4 (13632018..13638435)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 15 NC_049236.1 (13566206..13572624)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 15 NC_049275.1 (13428685..13435103)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 15 NC_049756.1 (13496699..13503116)

Chromosome 15 - NC_051819.1Genomic Context describing neighboring genes Neighboring gene STIL centriolar assembly protein Neighboring gene TAL bHLH transcription factor 1, erythroid differentiation factor Neighboring gene transcription initiation factor TFIID subunit 4-like Neighboring gene uncharacterized LOC102151503 Neighboring gene uncharacterized LOC111098978 Neighboring gene cytochrome P450 family 4 subfamily X member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
PDZK1-interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051819.1 Reference ROS_Cfam_1.0

    Range
    13629015..13635434
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038687754.1 → XP_038543682.1  PDZK1-interacting protein 1

    UniProtKB/TrEMBL
    A0A8I3NRD2
    Conserved Domains (1) summary
    pfam15807
    Location:1 → 114
    MAP17; Membrane-associated protein 117 kDa, PDZK1-interacting protein 1

  2. XM_038687753.1 → XP_038543681.1  PDZK1-interacting protein 1

    UniProtKB/TrEMBL
    A0A8I3NRD2
    Related
    ENSCAFP00845023279.1, ENSCAFT00845029641.1
    Conserved Domains (1) summary
    pfam15807
    Location:1 → 114
    MAP17; Membrane-associated protein 117 kDa, PDZK1-interacting protein 1

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049275.1 Alternate UMICH_Zoey_3.1

    Range
    13428685..13435103
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038495758.1 → XP_038351686.1  PDZK1-interacting protein 1

  2. XM_038495757.1 → XP_038351685.1  PDZK1-interacting protein 1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049756.1 Alternate UNSW_CanFamBas_1.0

    Range
    13496699..13503116
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038622005.1 → XP_038477933.1  PDZK1-interacting protein 1

  2. XM_038622004.1 → XP_038477932.1  PDZK1-interacting protein 1

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049236.1 Alternate UU_Cfam_GSD_1.0

    Range
    13566206..13572624
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038558133.1 → XP_038414061.1  PDZK1-interacting protein 1

    UniProtKB/TrEMBL
    A0A8C0SJT4

  2. XM_038558132.1 → XP_038414060.1  PDZK1-interacting protein 1

    UniProtKB/TrEMBL
    A0A8C0SJT4

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006597.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    13632018..13638435
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038451944.1 → XP_038307872.1  PDZK1-interacting protein 1

    UniProtKB/TrEMBL
    A0A8P0S9P9
    Conserved Domains (1) summary
    pfam15807
    Location:1 → 114
    MAP17; Membrane-associated protein 117 kDa, PDZK1-interacting protein 1

  2. XM_014119709.3 → XP_013975184.1  PDZK1-interacting protein 1

    UniProtKB/TrEMBL
    A0A8P0S9P9
    Conserved Domains (1) summary
    pfam15807
    Location:1 → 114
    MAP17; Membrane-associated protein 117 kDa, PDZK1-interacting protein 1
Nucleotide Protein
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