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ATG7 autophagy related 7 [ Canis lupus familiaris (dog) ]

Gene ID: 476533, updated on 5-Mar-2024

Summary

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Official Symbol
ATG7provided by VGNC
Official Full Name
autophagy related 7provided by VGNC
Primary source
VGNC:VGNC:38227
See related
Ensembl:ENSCAFG00845006288
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See ATG7 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
29
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (6945628..7184158, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (6951793..7189666, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (6989268..7228243, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (6661904..6900228, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (7018478..7256616, complement)

Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene copper transport protein ATOX1-like Neighboring gene vestigial like family member 4 Neighboring gene pancreatic progenitor cell differentiation and proliferation factor-like Neighboring gene uncharacterized LOC111091238 Neighboring gene histamine receptor H1 Neighboring gene uncharacterized LOC102151123

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Atg12 activating enzyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Atg8 activating enzyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in C-terminal protein lipidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to nitrogen starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in piecemeal microautophagy of the nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein modification by small protein conjugation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-like modifier-activating enzyme ATG7
Names
ATG7 autophagy related 7 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051824.1 Reference ROS_Cfam_1.0

    Range
    6945628..7184158 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038426910.1 → XP_038282838.1  ubiquitin-like modifier-activating enzyme ATG7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0K304, A0A8C0TIR6
    Related
    ENSCAFP00845008708.1, ENSCAFT00845011167.1
    Conserved Domains (1) summary
    TIGR01381
    Location:16 → 703
    E1_like_apg7; E1-like protein-activating enzyme Gsa7p/Apg7p

  2. XM_038426911.1 → XP_038282839.1  ubiquitin-like modifier-activating enzyme ATG7 isoform X2

    UniProtKB/TrEMBL
    A0A8I3N5G0, A0A8P0T7P9
    Conserved Domains (1) summary
    TIGR01381
    Location:16 → 697
    E1_like_apg7; E1-like protein-activating enzyme Gsa7p/Apg7p

  3. XM_038426912.1 → XP_038282840.1  ubiquitin-like modifier-activating enzyme ATG7 isoform X3

    UniProtKB/TrEMBL
    A0A8C0MCA2, A0A8I3MV23, A0A8I3N5G0, A0A8P0T7P9
    Related
    ENSCAFP00845009037.1, ENSCAFT00845011565.1
    Conserved Domains (1) summary
    TIGR01381
    Location:16 → 650
    E1_like_apg7; E1-like protein-activating enzyme Gsa7p/Apg7p

RNA

  1. XR_005297589.1 RNA Sequence

  2. XR_005297588.1 RNA Sequence

  3. XR_005297598.1 RNA Sequence

  4. XR_005297597.1 RNA Sequence

    Related
    ENSCAFT00845011398.1

  5. XR_005297596.1 RNA Sequence

  6. XR_005297595.1 RNA Sequence

  7. XR_005297593.1 RNA Sequence

  8. XR_005297594.1 RNA Sequence

  9. XR_005297590.1 RNA Sequence

  10. XR_005297591.1 RNA Sequence

  11. XR_005297599.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049280.1 Alternate UMICH_Zoey_3.1

    Range
    6661904..6900228 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038502704.1 → XP_038358632.1  ubiquitin-like modifier-activating enzyme ATG7 isoform X1

    Conserved Domains (1) summary
    TIGR01381
    Location:16 → 703
    E1_like_apg7; E1-like protein-activating enzyme Gsa7p/Apg7p

  2. XM_038502705.1 → XP_038358633.1  ubiquitin-like modifier-activating enzyme ATG7 isoform X2

    Conserved Domains (1) summary
    TIGR01381
    Location:16 → 697
    E1_like_apg7; E1-like protein-activating enzyme Gsa7p/Apg7p

  3. XM_038502706.1 → XP_038358634.1  ubiquitin-like modifier-activating enzyme ATG7 isoform X3

    Conserved Domains (1) summary
    TIGR01381
    Location:16 → 650
    E1_like_apg7; E1-like protein-activating enzyme Gsa7p/Apg7p

RNA

  1. XR_005340805.1 RNA Sequence

  2. XR_005340804.1 RNA Sequence

  3. XR_005340812.1 RNA Sequence

  4. XR_005340811.1 RNA Sequence

  5. XR_005340810.1 RNA Sequence

  6. XR_005340808.1 RNA Sequence

  7. XR_005340809.1 RNA Sequence

  8. XR_005340806.1 RNA Sequence

  9. XR_005340807.1 RNA Sequence

  10. XR_005340813.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

    Range
    7018478..7256616 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038629757.1 → XP_038485685.1  ubiquitin-like modifier-activating enzyme ATG7 isoform X1

    Conserved Domains (1) summary
    TIGR01381
    Location:16 → 703
    E1_like_apg7; E1-like protein-activating enzyme Gsa7p/Apg7p

  2. XM_038629758.1 → XP_038485686.1  ubiquitin-like modifier-activating enzyme ATG7 isoform X2

    Conserved Domains (1) summary
    TIGR01381
    Location:16 → 697
    E1_like_apg7; E1-like protein-activating enzyme Gsa7p/Apg7p

  3. XM_038629759.1 → XP_038485687.1  ubiquitin-like modifier-activating enzyme ATG7 isoform X3

    Conserved Domains (1) summary
    TIGR01381
    Location:16 → 650
    E1_like_apg7; E1-like protein-activating enzyme Gsa7p/Apg7p

RNA

  1. XR_005408570.1 RNA Sequence

  2. XR_005408569.1 RNA Sequence

  3. XR_005408578.1 RNA Sequence

  4. XR_005408577.1 RNA Sequence

  5. XR_005408576.1 RNA Sequence

  6. XR_005408575.1 RNA Sequence

  7. XR_005408573.1 RNA Sequence

  8. XR_005408574.1 RNA Sequence

  9. XR_005408571.1 RNA Sequence

  10. XR_005408572.1 RNA Sequence

  11. XR_005408579.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

    Range
    6989268..7228243 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038565624.1 → XP_038421552.1  ubiquitin-like modifier-activating enzyme ATG7 isoform X2

    UniProtKB/TrEMBL
    A0A8I3N5G0, A0A8P0T7P9
    Conserved Domains (1) summary
    TIGR01381
    Location:16 → 697
    E1_like_apg7; E1-like protein-activating enzyme Gsa7p/Apg7p

  2. XM_038565623.1 → XP_038421551.1  ubiquitin-like modifier-activating enzyme ATG7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0K304, A0A8C0TIR6
    Conserved Domains (1) summary
    TIGR01381
    Location:16 → 703
    E1_like_apg7; E1-like protein-activating enzyme Gsa7p/Apg7p

  3. XM_038565625.1 → XP_038421553.1  ubiquitin-like modifier-activating enzyme ATG7 isoform X3

    UniProtKB/TrEMBL
    A0A8C0MCA2, A0A8I3MV23, A0A8I3N5G0, A0A8P0T7P9
    Conserved Domains (1) summary
    TIGR01381
    Location:16 → 650
    E1_like_apg7; E1-like protein-activating enzyme Gsa7p/Apg7p

RNA

  1. XR_005374573.1 RNA Sequence

  2. XR_005374572.1 RNA Sequence

  3. XR_005374581.1 RNA Sequence

  4. XR_005374580.1 RNA Sequence

  5. XR_005374579.1 RNA Sequence

  6. XR_005374578.1 RNA Sequence

  7. XR_005374576.1 RNA Sequence

  8. XR_005374577.1 RNA Sequence

  9. XR_005374574.1 RNA Sequence

  10. XR_005374575.1 RNA Sequence

  11. XR_005374582.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    6951793..7189666 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_844756.5 → XP_849849.2  ubiquitin-like modifier-activating enzyme ATG7 isoform X1

    See identical proteins and their annotated locations for XP_849849.2

    UniProtKB/TrEMBL
    A0A8C0K304, A0A8C0TIR6
    Conserved Domains (1) summary
    TIGR01381
    Location:16 → 703
    E1_like_apg7; E1-like protein-activating enzyme Gsa7p/Apg7p

  2. XM_022406360.2 → XP_022262068.1  ubiquitin-like modifier-activating enzyme ATG7 isoform X2

    UniProtKB/TrEMBL
    A0A8I3N5G0, A0A8P0T7P9
    Conserved Domains (1) summary
    TIGR01381
    Location:16 → 697
    E1_like_apg7; E1-like protein-activating enzyme Gsa7p/Apg7p

  3. XM_022406362.2 → XP_022262070.1  ubiquitin-like modifier-activating enzyme ATG7 isoform X3

    UniProtKB/TrEMBL
    A0A8C0MCA2, A0A8I3MV23, A0A8I3N5G0, A0A8P0T7P9
    Conserved Domains (1) summary
    TIGR01381
    Location:16 → 650
    E1_like_apg7; E1-like protein-activating enzyme Gsa7p/Apg7p

RNA

  1. XR_002616575.2 RNA Sequence

  2. XR_002616574.2 RNA Sequence

  3. XR_002616580.2 RNA Sequence

  4. XR_005312642.1 RNA Sequence

  5. XR_005312641.1 RNA Sequence

  6. XR_005312640.1 RNA Sequence

  7. XR_002616578.2 RNA Sequence

  8. XR_002616579.2 RNA Sequence

  9. XR_002616576.2 RNA Sequence

  10. XR_002616577.2 RNA Sequence

  11. XR_002616581.2 RNA Sequence

Nucleotide Protein
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