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MED13L mediator complex subunit 13L [ Canis lupus familiaris (dog) ]

Gene ID: 477496, updated on 5-Mar-2024

Summary

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Official Symbol
MED13Lprovided by VGNC
Official Full Name
mediator complex subunit 13Lprovided by VGNC
Primary source
VGNC:VGNC:43123
See related
Ensembl:ENSCAFG00845025123
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
THRAP2
Orthologs
human mouse all
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Genomic context

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See MED13L in Genome Data Viewer
Location:
chromosome: 26
Exon count:
35
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 26 NC_051830.1 (13028568..13324202, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 26 NC_006608.4 (12764292..13059638, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 26 NC_049247.1 (13102596..13397898, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 26 NC_049286.1 (12990722..13286061, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 26 NC_049767.1 (13073281..13365481, complement)

Chromosome 26 - NC_051830.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119866091 Neighboring gene uncharacterized LOC119866092 Neighboring gene uncharacterized LOC111092685 Neighboring gene uncharacterized LOC102152770

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 13-like
Names
mediator complex subunit 13 like
thyroid hormone receptor associated protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051830.1 Reference ROS_Cfam_1.0

    Range
    13028568..13324202 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038436807.1 → XP_038292735.1  mediator of RNA polymerase II transcription subunit 13-like isoform X2

    UniProtKB/TrEMBL
    A0A8C0PII4
    Conserved Domains (3) summary
    pfam06333
    Location:1795 → 2210
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam11597
    Location:11 → 222
    Med13_N; Mediator complex subunit 13 N-terminal
    pfam18296
    Location:1414 → 1759
    MID_MedPIWI; MID domain of medPIWI

  2. XM_038436806.1 → XP_038292734.1  mediator of RNA polymerase II transcription subunit 13-like isoform X1

    UniProtKB/TrEMBL
    A0A8C0PII4
    Conserved Domains (3) summary
    pfam06333
    Location:1796 → 2211
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam11597
    Location:11 → 222
    Med13_N; Mediator complex subunit 13 N-terminal
    pfam18296
    Location:1415 → 1760
    MID_MedPIWI; MID domain of medPIWI

  3. XM_038436808.1 → XP_038292736.1  mediator of RNA polymerase II transcription subunit 13-like isoform X3

    UniProtKB/TrEMBL
    A0A8C0KXN6, A0A8C0PII4, A0A8C0TW71, A0A8I3PPH0
    Related
    ENSCAFP00845035000.1, ENSCAFT00845044668.1
    Conserved Domains (3) summary
    pfam06333
    Location:1796 → 2199
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam11597
    Location:11 → 222
    Med13_N; Mediator complex subunit 13 N-terminal
    pfam18296
    Location:1415 → 1760
    MID_MedPIWI; MID domain of medPIWI

  4. XM_038436810.1 → XP_038292738.1  mediator of RNA polymerase II transcription subunit 13-like isoform X4

    UniProtKB/TrEMBL
    A0A8C0TT25
    Conserved Domains (2) summary
    pfam06333
    Location:1697 → 2112
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam18296
    Location:1316 → 1661
    MID_MedPIWI; MID domain of medPIWI

  5. XM_038436811.1 → XP_038292739.1  mediator of RNA polymerase II transcription subunit 13-like isoform X5

    UniProtKB/TrEMBL
    A0A8C0TSY0, A0A8P0NBE4
    Conserved Domains (2) summary
    pfam06333
    Location:1680 → 2095
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam18296
    Location:1299 → 1644
    MID_MedPIWI; MID domain of medPIWI

RNA

  1. XR_005302362.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049286.1 Alternate UMICH_Zoey_3.1

    Range
    12990722..13286061 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038511713.1 → XP_038367641.1  mediator of RNA polymerase II transcription subunit 13-like isoform X2

    Conserved Domains (3) summary
    pfam06333
    Location:1795 → 2210
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam11597
    Location:11 → 222
    Med13_N; Mediator complex subunit 13 N-terminal
    pfam18296
    Location:1414 → 1759
    MID_MedPIWI; MID domain of medPIWI

  2. XM_038511712.1 → XP_038367640.1  mediator of RNA polymerase II transcription subunit 13-like isoform X1

    Conserved Domains (3) summary
    pfam06333
    Location:1796 → 2211
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam11597
    Location:11 → 222
    Med13_N; Mediator complex subunit 13 N-terminal
    pfam18296
    Location:1415 → 1760
    MID_MedPIWI; MID domain of medPIWI

  3. XM_038511714.1 → XP_038367642.1  mediator of RNA polymerase II transcription subunit 13-like isoform X3

    Conserved Domains (3) summary
    pfam06333
    Location:1796 → 2199
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam11597
    Location:11 → 222
    Med13_N; Mediator complex subunit 13 N-terminal
    pfam18296
    Location:1415 → 1760
    MID_MedPIWI; MID domain of medPIWI

  4. XM_038511715.1 → XP_038367643.1  mediator of RNA polymerase II transcription subunit 13-like isoform X4

    Conserved Domains (2) summary
    pfam06333
    Location:1697 → 2112
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam18296
    Location:1316 → 1661
    MID_MedPIWI; MID domain of medPIWI

  5. XM_038511716.1 → XP_038367644.1  mediator of RNA polymerase II transcription subunit 13-like isoform X5

    Conserved Domains (2) summary
    pfam06333
    Location:1680 → 2095
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam18296
    Location:1299 → 1644
    MID_MedPIWI; MID domain of medPIWI

RNA

  1. XR_005345445.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049767.1 Alternate UNSW_CanFamBas_1.0

    Range
    13073281..13365481 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038639394.1 → XP_038495322.1  mediator of RNA polymerase II transcription subunit 13-like isoform X2

  2. XM_038639393.1 → XP_038495321.1  mediator of RNA polymerase II transcription subunit 13-like isoform X1

  3. XM_038639395.1 → XP_038495323.1  mediator of RNA polymerase II transcription subunit 13-like isoform X3

  4. XM_038639396.1 → XP_038495324.1  mediator of RNA polymerase II transcription subunit 13-like isoform X4

  5. XM_038639397.1 → XP_038495325.1  mediator of RNA polymerase II transcription subunit 13-like isoform X5

RNA

  1. XR_005413030.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049247.1 Alternate UU_Cfam_GSD_1.0

    Range
    13102596..13397898 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038575206.1 → XP_038431134.1  mediator of RNA polymerase II transcription subunit 13-like isoform X2

    UniProtKB/TrEMBL
    A0A8C0PII4
    Conserved Domains (3) summary
    pfam06333
    Location:1795 → 2210
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam11597
    Location:11 → 222
    Med13_N; Mediator complex subunit 13 N-terminal
    pfam18296
    Location:1414 → 1759
    MID_MedPIWI; MID domain of medPIWI

  2. XM_038575205.1 → XP_038431133.1  mediator of RNA polymerase II transcription subunit 13-like isoform X1

    UniProtKB/TrEMBL
    A0A8C0PII4
    Conserved Domains (3) summary
    pfam06333
    Location:1796 → 2211
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam11597
    Location:11 → 222
    Med13_N; Mediator complex subunit 13 N-terminal
    pfam18296
    Location:1415 → 1760
    MID_MedPIWI; MID domain of medPIWI

  3. XM_038575207.1 → XP_038431135.1  mediator of RNA polymerase II transcription subunit 13-like isoform X3

    UniProtKB/TrEMBL
    A0A8C0KXN6, A0A8C0PII4, A0A8C0TW71, A0A8I3PPH0
    Conserved Domains (3) summary
    pfam06333
    Location:1796 → 2199
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam11597
    Location:11 → 222
    Med13_N; Mediator complex subunit 13 N-terminal
    pfam18296
    Location:1415 → 1760
    MID_MedPIWI; MID domain of medPIWI

  4. XM_038575208.1 → XP_038431136.1  mediator of RNA polymerase II transcription subunit 13-like isoform X4

    UniProtKB/TrEMBL
    A0A8C0TT25
    Conserved Domains (2) summary
    pfam06333
    Location:1697 → 2112
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam18296
    Location:1316 → 1661
    MID_MedPIWI; MID domain of medPIWI

  5. XM_038575209.1 → XP_038431137.1  mediator of RNA polymerase II transcription subunit 13-like isoform X5

    UniProtKB/TrEMBL
    A0A8C0TSY0, A0A8P0NBE4
    Conserved Domains (2) summary
    pfam06333
    Location:1680 → 2095
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam18296
    Location:1299 → 1644
    MID_MedPIWI; MID domain of medPIWI

RNA

  1. XR_005379205.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006608.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    12764292..13059638 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038459321.1 → XP_038315249.1  mediator of RNA polymerase II transcription subunit 13-like isoform X2

    UniProtKB/TrEMBL
    A0A8C0PII4
    Conserved Domains (3) summary
    pfam06333
    Location:1795 → 2210
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam11597
    Location:11 → 222
    Med13_N; Mediator complex subunit 13 N-terminal
    pfam18296
    Location:1414 → 1759
    MID_MedPIWI; MID domain of medPIWI

  2. XM_038459320.1 → XP_038315248.1  mediator of RNA polymerase II transcription subunit 13-like isoform X1

    UniProtKB/TrEMBL
    A0A8C0PII4
    Conserved Domains (3) summary
    pfam06333
    Location:1796 → 2211
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam11597
    Location:11 → 222
    Med13_N; Mediator complex subunit 13 N-terminal
    pfam18296
    Location:1415 → 1760
    MID_MedPIWI; MID domain of medPIWI

  3. XM_038459322.1 → XP_038315250.1  mediator of RNA polymerase II transcription subunit 13-like isoform X3

    UniProtKB/TrEMBL
    A0A8C0KXN6, A0A8C0PII4, A0A8C0TW71, A0A8I3PPH0
    Conserved Domains (3) summary
    pfam06333
    Location:1796 → 2199
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam11597
    Location:11 → 222
    Med13_N; Mediator complex subunit 13 N-terminal
    pfam18296
    Location:1415 → 1760
    MID_MedPIWI; MID domain of medPIWI

  4. XM_038459323.1 → XP_038315251.1  mediator of RNA polymerase II transcription subunit 13-like isoform X4

    UniProtKB/TrEMBL
    A0A8C0TT25
    Conserved Domains (2) summary
    pfam06333
    Location:1697 → 2112
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam18296
    Location:1316 → 1661
    MID_MedPIWI; MID domain of medPIWI

  5. XM_038459324.1 → XP_038315252.1  mediator of RNA polymerase II transcription subunit 13-like isoform X5

    UniProtKB/TrEMBL
    A0A8C0TSY0, A0A8P0NBE4
    Conserved Domains (2) summary
    pfam06333
    Location:1680 → 2095
    Med13_C; Mediator complex subunit 13 C-terminal
    pfam18296
    Location:1299 → 1644
    MID_MedPIWI; MID domain of medPIWI

RNA

  1. XR_005315063.1 RNA Sequence

Nucleotide Protein
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