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SLC6A18 solute carrier family 6 member 18 [ Canis lupus familiaris (dog) ]

Gene ID: 478631, updated on 5-Mar-2024

Summary

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Official Symbol
SLC6A18provided by VGNC
Official Full Name
solute carrier family 6 member 18provided by VGNC
Primary source
VGNC:VGNC:46460
See related
Ensembl:ENSCAFG00845026287
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See SLC6A18 in Genome Data Viewer
Location:
chromosome: 34
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 34 NC_051838.1 (11208459..11228159, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 34 NC_006616.4 (15817657..15837358, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 34 NC_049255.1 (11454210..11469522, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 34 NC_049294.1 (11259258..11278952, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 34 NC_049775.1 (11243187..11258500, complement)

Chromosome 34 - NC_051838.1Genomic Context describing neighboring genes Neighboring gene CLPTM1 like Neighboring gene uncharacterized LOC119867433 Neighboring gene telomerase reverse transcriptase Neighboring gene solute carrier family 6 member 19 Neighboring gene solute carrier family 12 member 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium-dependent neutral amino acid transporter B(0)AT3; inactive sodium-dependent neutral amino acid transporter B(0)AT3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051838.1 Reference ROS_Cfam_1.0

    Range
    11208459..11228159 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038445539.1 → XP_038301467.1  inactive sodium-dependent neutral amino acid transporter B(0)AT3

    UniProtKB/TrEMBL
    A0A8C0LGC1, A0A8C0MNP0
    Related
    ENSCAFP00845036413.1, ENSCAFT00845046368.1
    Conserved Domains (1) summary
    cl00456
    Location:17 → 592
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049294.1 Alternate UMICH_Zoey_3.1

    Range
    11259258..11278952 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038519714.1 → XP_038375642.1  inactive sodium-dependent neutral amino acid transporter B(0)AT3

    Conserved Domains (1) summary
    cl00456
    Location:17 → 592
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049775.1 Alternate UNSW_CanFamBas_1.0

    Range
    11243187..11258500 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038647771.1 → XP_038503699.1  inactive sodium-dependent neutral amino acid transporter B(0)AT3

    Conserved Domains (1) summary
    cl00456
    Location:17 → 592
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049255.1 Alternate UU_Cfam_GSD_1.0

    Range
    11454210..11469522 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038583359.1 → XP_038439287.1  inactive sodium-dependent neutral amino acid transporter B(0)AT3

    UniProtKB/TrEMBL
    A0A8C0LGC1, A0A8C0MNP0
    Conserved Domains (1) summary
    cl00456
    Location:17 → 592
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006616.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    15817657..15837358 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_535804.6 → XP_535804.3  inactive sodium-dependent neutral amino acid transporter B(0)AT3

    UniProtKB/TrEMBL
    A0A8C0LGC1, A0A8C0MNP0
    Conserved Domains (1) summary
    cl00456
    Location:17 → 592
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
Nucleotide Protein
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