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ACTL6A actin like 6A [ Canis lupus familiaris (dog) ]

Gene ID: 478637, updated on 5-Mar-2024

Summary

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Official Symbol
ACTL6Aprovided by VGNC
Official Full Name
actin like 6Aprovided by VGNC
Primary source
VGNC:VGNC:37542
See related
Ensembl:ENSCAFG00845016262
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See ACTL6A in Genome Data Viewer
Location:
chromosome: 34
Exon count:
17
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 34 NC_051838.1 (12858403..12886719)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 34 NC_006616.4 (17102646..17130954)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 34 NC_049255.1 (13132262..13160666)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 34 NC_049294.1 (12909490..12937878)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 34 NC_049775.1 (12891830..12920136)

Chromosome 34 - NC_051838.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119867489 Neighboring gene 60S ribosomal protein L11-like Neighboring gene mitochondrial ribosomal protein L47 Neighboring gene SIN3-HDAC complex-associated factor-like Neighboring gene NADH:ubiquinone oxidoreductase subunit B5 Neighboring gene 40S ribosomal protein S26-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NuA4 histone acetyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of SWI/SNF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
actin-like protein 6A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051838.1 Reference ROS_Cfam_1.0

    Range
    12858403..12886719
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038445601.1 → XP_038301529.1  actin-like protein 6A isoform X2

    UniProtKB/TrEMBL
    A0A8C0LCE2, A0A8C0NUW2, A0A8C0T8A5, A0A8I3NUK7
    Related
    ENSCAFP00845022745.1, ENSCAFT00845028906.1
    Conserved Domains (1) summary
    pfam00022
    Location:11 → 429
    Actin

  2. XM_038445602.1 → XP_038301530.1  actin-like protein 6A isoform X3

    UniProtKB/TrEMBL
    A0A8C0NUW2, A0A8C0T696
    Conserved Domains (1) summary
    pfam00022
    Location:17 → 387
    Actin

  3. XM_038445600.1 → XP_038301528.1  actin-like protein 6A isoform X1

    UniProtKB/TrEMBL
    A0A8C0NUW2, A0A8I3RZ83
    Related
    ENSCAFP00845022777.1, ENSCAFT00845028949.1
    Conserved Domains (1) summary
    pfam00022
    Location:35 → 453
    Actin

  4. XM_038445604.1 → XP_038301532.1  actin-like protein 6A isoform X3

    UniProtKB/TrEMBL
    A0A8C0NUW2, A0A8C0T696
    Conserved Domains (1) summary
    pfam00022
    Location:17 → 387
    Actin

  5. XM_038445603.1 → XP_038301531.1  actin-like protein 6A isoform X3

    UniProtKB/TrEMBL
    A0A8C0NUW2, A0A8C0T696
    Conserved Domains (1) summary
    pfam00022
    Location:17 → 387
    Actin

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049294.1 Alternate UMICH_Zoey_3.1

    Range
    12909490..12937878
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038519781.1 → XP_038375709.1  actin-like protein 6A isoform X2

    Conserved Domains (1) summary
    pfam00022
    Location:11 → 429
    Actin

  2. XM_038519782.1 → XP_038375710.1  actin-like protein 6A isoform X3

    Conserved Domains (1) summary
    pfam00022
    Location:17 → 387
    Actin

  3. XM_038519780.1 → XP_038375708.1  actin-like protein 6A isoform X1

    Conserved Domains (1) summary
    pfam00022
    Location:35 → 453
    Actin

  4. XM_038519784.1 → XP_038375712.1  actin-like protein 6A isoform X3

    Conserved Domains (1) summary
    pfam00022
    Location:17 → 387
    Actin

  5. XM_038519783.1 → XP_038375711.1  actin-like protein 6A isoform X3

    Conserved Domains (1) summary
    pfam00022
    Location:17 → 387
    Actin

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049775.1 Alternate UNSW_CanFamBas_1.0

    Range
    12891830..12920136
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038647833.1 → XP_038503761.1  actin-like protein 6A isoform X2

    Conserved Domains (1) summary
    pfam00022
    Location:11 → 429
    Actin

  2. XM_038647834.1 → XP_038503762.1  actin-like protein 6A isoform X3

    Conserved Domains (1) summary
    pfam00022
    Location:17 → 387
    Actin

  3. XM_038647832.1 → XP_038503760.1  actin-like protein 6A isoform X1

    Conserved Domains (1) summary
    pfam00022
    Location:35 → 453
    Actin

  4. XM_038647836.1 → XP_038503764.1  actin-like protein 6A isoform X3

    Conserved Domains (1) summary
    pfam00022
    Location:17 → 387
    Actin

  5. XM_038647835.1 → XP_038503763.1  actin-like protein 6A isoform X3

    Conserved Domains (1) summary
    pfam00022
    Location:17 → 387
    Actin

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049255.1 Alternate UU_Cfam_GSD_1.0

    Range
    13132262..13160666
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038583420.1 → XP_038439348.1  actin-like protein 6A isoform X2

    UniProtKB/TrEMBL
    A0A8C0LCE2, A0A8C0NUW2, A0A8C0T8A5, A0A8I3NUK7
    Conserved Domains (1) summary
    pfam00022
    Location:11 → 429
    Actin

  2. XM_038583421.1 → XP_038439349.1  actin-like protein 6A isoform X3

    UniProtKB/TrEMBL
    A0A8C0NUW2, A0A8C0T696
    Conserved Domains (1) summary
    pfam00022
    Location:17 → 387
    Actin

  3. XM_038583419.1 → XP_038439347.1  actin-like protein 6A isoform X1

    UniProtKB/TrEMBL
    A0A8C0NUW2, A0A8I3RZ83
    Conserved Domains (1) summary
    pfam00022
    Location:35 → 453
    Actin

  4. XM_038583423.1 → XP_038439351.1  actin-like protein 6A isoform X3

    UniProtKB/TrEMBL
    A0A8C0NUW2, A0A8C0T696
    Conserved Domains (1) summary
    pfam00022
    Location:17 → 387
    Actin

  5. XM_038583422.1 → XP_038439350.1  actin-like protein 6A isoform X3

    UniProtKB/TrEMBL
    A0A8C0NUW2, A0A8C0T696
    Conserved Domains (1) summary
    pfam00022
    Location:17 → 387
    Actin

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006616.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    17102646..17130954
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038462875.1 → XP_038318803.1  actin-like protein 6A isoform X2

    UniProtKB/TrEMBL
    A0A8C0LCE2, A0A8C0NUW2, A0A8C0T8A5, A0A8I3NUK7
    Conserved Domains (1) summary
    pfam00022
    Location:11 → 429
    Actin

  2. XM_005639730.4 → XP_005639787.1  actin-like protein 6A isoform X3

    See identical proteins and their annotated locations for XP_005639787.1

    UniProtKB/TrEMBL
    A0A8C0NUW2, A0A8C0T696
    Conserved Domains (1) summary
    pfam00022
    Location:17 → 387
    Actin

  3. XM_038462874.1 → XP_038318802.1  actin-like protein 6A isoform X1

    UniProtKB/TrEMBL
    A0A8C0NUW2, A0A8I3RZ83
    Conserved Domains (1) summary
    pfam00022
    Location:35 → 453
    Actin

  4. XM_038462876.1 → XP_038318804.1  actin-like protein 6A isoform X3

    UniProtKB/TrEMBL
    A0A8C0NUW2, A0A8C0T696
    Conserved Domains (1) summary
    pfam00022
    Location:17 → 387
    Actin

  5. XM_005639731.4 → XP_005639788.1  actin-like protein 6A isoform X3

    See identical proteins and their annotated locations for XP_005639788.1

    UniProtKB/TrEMBL
    A0A8C0NUW2, A0A8C0T696
    Conserved Domains (1) summary
    pfam00022
    Location:17 → 387
    Actin
Nucleotide Protein
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