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RPL17 ribosomal protein L17 [ Canis lupus familiaris (dog) ]

Gene ID: 480221, updated on 5-Mar-2024

Summary

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Gene symbol
RPL17
Gene description
ribosomal protein L17
See related
Ensembl:ENSCAFG00845016396
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
RPL17L
Orthologs
human mouse all
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Genomic context

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See RPL17 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 7 NC_051811.1 (79330969..79334939)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 7 NC_006589.4 (78669003..78672981)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 7 NC_049228.1 (79360996..79364974)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 7 NC_049267.1 (79046062..79050027)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 7 NC_049748.1 (79076136..79080109)

Chromosome 7 - NC_051811.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119872624 Neighboring gene uncharacterized LOC119872625 Neighboring gene lipase G, endothelial type Neighboring gene small nucleolar RNA SNORD58 Neighboring gene small nucleolar RNA SNORD58 Neighboring gene small nucleolar RNA SNORD58 Neighboring gene chromosome 7 C18orf32 homolog Neighboring gene dymeclin Neighboring gene uncharacterized LOC111096838

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051811.1 Reference ROS_Cfam_1.0

    Range
    79330969..79334939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038672789.1 → XP_038528717.1  60S ribosomal protein L17

    UniProtKB/TrEMBL
    A0A8C0R9Y9, A0A8C0SK31, A0A8I3S244
    Related
    ENSCAFP00845022945.1, ENSCAFT00845029177.1
    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049267.1 Alternate UMICH_Zoey_3.1

    Range
    79046062..79050027
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038482513.1 → XP_038338441.1  60S ribosomal protein L17

    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049748.1 Alternate UNSW_CanFamBas_1.0

    Range
    79076136..79080109
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038608081.1 → XP_038464009.1  60S ribosomal protein L17

    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049228.1 Alternate UU_Cfam_GSD_1.0

    Range
    79360996..79364974
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038543982.1 → XP_038399910.1  60S ribosomal protein L17

    UniProtKB/TrEMBL
    A0A8C0R9Y9, A0A8C0SK31, A0A8I3S244
    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006589.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    78669003..78672981
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005623128.4 → XP_005623185.2  60S ribosomal protein L17

    UniProtKB/TrEMBL
    A0A8C0R9Y9, A0A8C0SK31, A0A8I3S244
    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional
Nucleotide Protein
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