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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051818.1 Reference ROS_Cfam_1.0
- Range
-
380493..503404 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038686046.1 → XP_038541974.1 LOW QUALITY PROTEIN: obscurin isoform X1
- Conserved Domains (12) summary
-
- cd12025
Location:5694 → 5756
- SH3_Obscurin_like; Src homology 3 domain of Obscurin and similar proteins
- smart00060
Location:7623 → 7701
- FN3; Fibronectin type 3 domain
- smart00409
Location:3770 → 3847
- IG; Immunoglobulin
- smart00410
Location:4042 → 4118
- IG_like; Immunoglobulin like
- cd00063
Location:4576 → 4661
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd13239
Location:5974 → 6098
- PH_Obscurin; Obscurin pleckstrin homology (PH) domain
- pfam07679
Location:9 → 98
- I-set; Immunoglobulin I-set domain
- cd00096
Location:891 → 893
- Ig; Ig strand A [structural motif]
- cd20971
Location:6106 → 6196
- IgI_1_Titin-A168_like; First immunoglobulin-like domains A168 within the A-band segment of human cardiac titin, and similar domains; a member of the I-set of IgSF domains
- cl02571
Location:5789 → 5965
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cl11960
Location:891 → 972
- Ig; Immunoglobulin domain
- cl21453
Location:6558 → 6814
- PKc_like; Protein Kinases, catalytic domain
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049274.1 Alternate UMICH_Zoey_3.1
- Range
-
566842..694225 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038494126.1 → XP_038350054.1 obscurin isoform X4
-
XM_038494125.1 → XP_038350053.1 obscurin isoform X3
-
XM_038494124.1 → XP_038350052.1 obscurin isoform X2
-
XM_038494123.1 → XP_038350051.1 obscurin isoform X1
-
XM_038494127.1 → XP_038350055.1 obscurin isoform X5
-
XM_038494128.1 → XP_038350056.1 obscurin isoform X6
-
XM_038494129.1 → XP_038350057.1 obscurin isoform X7
-
XM_038494131.1 → XP_038350059.1 obscurin isoform X9
-
XM_038494130.1 → XP_038350058.1 obscurin isoform X8
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049755.1 Alternate UNSW_CanFamBas_1.0
- Range
-
327479..475088 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038620361.1 → XP_038476289.1 LOW QUALITY PROTEIN: obscurin isoform X10
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049235.1 Alternate UU_Cfam_GSD_1.0
- Range
-
337710..460914 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038556423.1 → XP_038412351.1 obscurin isoform X16
-
XM_038556421.1 → XP_038412349.1 obscurin isoform X14
-
XM_038556420.1 → XP_038412348.1 obscurin isoform X13
-
XM_038556419.1 → XP_038412347.1 obscurin isoform X12
-
XM_038556418.1 → XP_038412346.1 obscurin isoform X11
-
XM_038556422.1 → XP_038412350.1 obscurin isoform X15
-
XM_038556424.1 → XP_038412352.1 obscurin isoform X17
-
XM_038556425.1 → XP_038412353.1 obscurin isoform X18
-
XM_038556428.1 → XP_038412356.1 obscurin isoform X20
-
XM_038556426.1 → XP_038412354.1 obscurin isoform X19
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006596.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
368668..495174
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038437861.1 → XP_038293789.1 obscurin isoform X21
- Conserved Domains (12) summary
-
- cd12025
Location:5790 → 5852
- SH3_Obscurin_like; Src homology 3 domain of Obscurin and similar proteins
- smart00060
Location:7719 → 7797
- FN3; Fibronectin type 3 domain
- smart00409
Location:3866 → 3943
- IG; Immunoglobulin
- smart00410
Location:4138 → 4214
- IG_like; Immunoglobulin like
- cd00063
Location:4672 → 4757
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd13239
Location:6070 → 6194
- PH_Obscurin; Obscurin pleckstrin homology (PH) domain
- pfam07679
Location:9 → 98
- I-set; Immunoglobulin I-set domain
- cd00096
Location:891 → 893
- Ig; Ig strand A [structural motif]
- cd20971
Location:6202 → 6292
- IgI_1_Titin-A168_like; First immunoglobulin-like domains A168 within the A-band segment of human cardiac titin, and similar domains; a member of the I-set of IgSF domains
- cl02571
Location:5885 → 6061
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cl11960
Location:891 → 972
- Ig; Immunoglobulin domain
- cl21453
Location:6654 → 6910
- PKc_like; Protein Kinases, catalytic domain
-
XM_038437862.1 → XP_038293790.1 obscurin isoform X22
- Conserved Domains (12) summary
-
- cd12025
Location:5790 → 5852
- SH3_Obscurin_like; Src homology 3 domain of Obscurin and similar proteins
- smart00060
Location:7656 → 7734
- FN3; Fibronectin type 3 domain
- smart00409
Location:3957 → 4032
- IG; Immunoglobulin
- smart00410
Location:3866 → 3943
- IG_like; Immunoglobulin like
- cd00063
Location:4672 → 4757
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd13239
Location:6070 → 6194
- PH_Obscurin; Obscurin pleckstrin homology (PH) domain
- pfam07679
Location:9 → 98
- I-set; Immunoglobulin I-set domain
- cd00096
Location:891 → 893
- Ig; Ig strand A [structural motif]
- cd20971
Location:6202 → 6292
- IgI_1_Titin-A168_like; First immunoglobulin-like domains A168 within the A-band segment of human cardiac titin, and similar domains; a member of the I-set of IgSF domains
- cl02571
Location:5885 → 6061
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cl11960
Location:891 → 972
- Ig; Immunoglobulin domain
- cl21453
Location:6591 → 6847
- PKc_like; Protein Kinases, catalytic domain
-
XM_038437878.1 → XP_038293806.1 obscurin isoform X26
- Conserved Domains (12) summary
-
- cd12025
Location:5610 → 5672
- SH3_Obscurin_like; Src homology 3 domain of Obscurin and similar proteins
- smart00060
Location:7539 → 7617
- FN3; Fibronectin type 3 domain
- smart00409
Location:4138 → 4214
- IG; Immunoglobulin
- smart00410
Location:3866 → 3943
- IG_like; Immunoglobulin like
- cd00063
Location:4492 → 4577
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd13239
Location:5890 → 6014
- PH_Obscurin; Obscurin pleckstrin homology (PH) domain
- pfam07679
Location:9 → 98
- I-set; Immunoglobulin I-set domain
- cd00096
Location:891 → 893
- Ig; Ig strand A [structural motif]
- cd20971
Location:6022 → 6112
- IgI_1_Titin-A168_like; First immunoglobulin-like domains A168 within the A-band segment of human cardiac titin, and similar domains; a member of the I-set of IgSF domains
- cl02571
Location:5705 → 5881
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cl11960
Location:891 → 972
- Ig; Immunoglobulin domain
- cl21453
Location:6474 → 6730
- PKc_like; Protein Kinases, catalytic domain
-
XM_038437865.1 → XP_038293793.1 obscurin isoform X24
- Conserved Domains (12) summary
-
- cd12025
Location:5614 → 5676
- SH3_Obscurin_like; Src homology 3 domain of Obscurin and similar proteins
- smart00060
Location:7543 → 7621
- FN3; Fibronectin type 3 domain
- smart00409
Location:3690 → 3767
- IG; Immunoglobulin
- smart00410
Location:3962 → 4038
- IG_like; Immunoglobulin like
- cd00063
Location:4496 → 4581
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd13239
Location:5894 → 6018
- PH_Obscurin; Obscurin pleckstrin homology (PH) domain
- pfam07679
Location:9 → 98
- I-set; Immunoglobulin I-set domain
- cd00096
Location:891 → 893
- Ig; Ig strand A [structural motif]
- cd20971
Location:6026 → 6116
- IgI_1_Titin-A168_like; First immunoglobulin-like domains A168 within the A-band segment of human cardiac titin, and similar domains; a member of the I-set of IgSF domains
- cl02571
Location:5709 → 5885
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cl11960
Location:891 → 972
- Ig; Immunoglobulin domain
- cl21453
Location:6478 → 6734
- PKc_like; Protein Kinases, catalytic domain
-
XM_038437863.1 → XP_038293791.1 obscurin isoform X23
- Conserved Domains (12) summary
-
- cd12025
Location:5702 → 5764
- SH3_Obscurin_like; Src homology 3 domain of Obscurin and similar proteins
- smart00060
Location:7631 → 7709
- FN3; Fibronectin type 3 domain
- smart00409
Location:3778 → 3855
- IG; Immunoglobulin
- smart00410
Location:4050 → 4126
- IG_like; Immunoglobulin like
- cd00063
Location:4584 → 4669
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd13239
Location:5982 → 6106
- PH_Obscurin; Obscurin pleckstrin homology (PH) domain
- pfam07679
Location:9 → 98
- I-set; Immunoglobulin I-set domain
- cd00096
Location:891 → 893
- Ig; Ig strand A [structural motif]
- cd20971
Location:6114 → 6204
- IgI_1_Titin-A168_like; First immunoglobulin-like domains A168 within the A-band segment of human cardiac titin, and similar domains; a member of the I-set of IgSF domains
- cl02571
Location:5797 → 5973
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cl11960
Location:891 → 972
- Ig; Immunoglobulin domain
- cl21453
Location:6566 → 6822
- PKc_like; Protein Kinases, catalytic domain
-
XM_038437870.1 → XP_038293798.1 obscurin isoform X25
- Conserved Domains (12) summary
-
- cd12025
Location:5614 → 5676
- SH3_Obscurin_like; Src homology 3 domain of Obscurin and similar proteins
- smart00060
Location:7543 → 7621
- FN3; Fibronectin type 3 domain
- smart00409
Location:3962 → 4038
- IG; Immunoglobulin
- smart00410
Location:3690 → 3767
- IG_like; Immunoglobulin like
- cd00063
Location:4496 → 4581
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd13239
Location:5894 → 6018
- PH_Obscurin; Obscurin pleckstrin homology (PH) domain
- pfam07679
Location:9 → 98
- I-set; Immunoglobulin I-set domain
- cd00096
Location:891 → 893
- Ig; Ig strand A [structural motif]
- cd20971
Location:6026 → 6116
- IgI_1_Titin-A168_like; First immunoglobulin-like domains A168 within the A-band segment of human cardiac titin, and similar domains; a member of the I-set of IgSF domains
- cl02571
Location:5709 → 5885
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cl11960
Location:891 → 972
- Ig; Immunoglobulin domain
- cl21453
Location:6478 → 6734
- PKc_like; Protein Kinases, catalytic domain
-
XM_038437880.1 → XP_038293808.1 obscurin isoform X27
- Conserved Domains (11) summary
-
- cd12025
Location:5790 → 5852
- SH3_Obscurin_like; Src homology 3 domain of Obscurin and similar proteins
- smart00409
Location:3866 → 3943
- IG; Immunoglobulin
- smart00410
Location:3069 → 3145
- IG_like; Immunoglobulin like
- cd00063
Location:4672 → 4757
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd13239
Location:6070 → 6194
- PH_Obscurin; Obscurin pleckstrin homology (PH) domain
- pfam07679
Location:9 → 98
- I-set; Immunoglobulin I-set domain
- cd00096
Location:891 → 893
- Ig; Ig strand A [structural motif]
- cd20971
Location:6202 → 6292
- IgI_1_Titin-A168_like; First immunoglobulin-like domains A168 within the A-band segment of human cardiac titin, and similar domains; a member of the I-set of IgSF domains
- cl02571
Location:5885 → 6061
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cl11960
Location:891 → 972
- Ig; Immunoglobulin domain
- cl21453
Location:6654 → 6844
- PKc_like; Protein Kinases, catalytic domain
-
XM_038437885.1 → XP_038293813.1 obscurin isoform X28
- Conserved Domains (12) summary
-
- PHA03201
Location:6432 → 6502
- PHA03201; uracil DNA glycosylase; Provisional
- smart00015
Location:5053 → 5074
- IQ; Calmodulin-binding motif
- cd12025
Location:5790 → 5852
- SH3_Obscurin_like; Src homology 3 domain of Obscurin and similar proteins
- smart00409
Location:4408 → 4481
- IG; Immunoglobulin
- smart00410
Location:3866 → 3943
- IG_like; Immunoglobulin like
- cd00063
Location:4672 → 4757
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd13239
Location:6070 → 6194
- PH_Obscurin; Obscurin pleckstrin homology (PH) domain
- pfam07679
Location:9 → 98
- I-set; Immunoglobulin I-set domain
- cd00096
Location:891 → 893
- Ig; Ig strand A [structural motif]
- cd20971
Location:6202 → 6292
- IgI_1_Titin-A168_like; First immunoglobulin-like domains A168 within the A-band segment of human cardiac titin, and similar domains; a member of the I-set of IgSF domains
- cl02571
Location:5885 → 6061
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cl11960
Location:891 → 972
- Ig; Immunoglobulin domain
-
XM_038437896.1 → XP_038293824.1 obscurin isoform X30
- Conserved Domains (12) summary
-
- PHA03201
Location:6252 → 6322
- PHA03201; uracil DNA glycosylase; Provisional
- smart00015
Location:4873 → 4894
- IQ; Calmodulin-binding motif
- cd12025
Location:5610 → 5672
- SH3_Obscurin_like; Src homology 3 domain of Obscurin and similar proteins
- smart00409
Location:3069 → 3145
- IG; Immunoglobulin
- smart00410
Location:3866 → 3943
- IG_like; Immunoglobulin like
- cd00063
Location:4492 → 4577
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd13239
Location:5890 → 6014
- PH_Obscurin; Obscurin pleckstrin homology (PH) domain
- pfam07679
Location:9 → 98
- I-set; Immunoglobulin I-set domain
- cd00096
Location:891 → 893
- Ig; Ig strand A [structural motif]
- cd20971
Location:6022 → 6112
- IgI_1_Titin-A168_like; First immunoglobulin-like domains A168 within the A-band segment of human cardiac titin, and similar domains; a member of the I-set of IgSF domains
- cl02571
Location:5705 → 5881
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cl11960
Location:891 → 972
- Ig; Immunoglobulin domain
-
XM_038437888.1 → XP_038293816.1 obscurin isoform X29
- Conserved Domains (11) summary
-
- smart00015
Location:5053 → 5074
- IQ; Calmodulin-binding motif
- cd12025
Location:5790 → 5852
- SH3_Obscurin_like; Src homology 3 domain of Obscurin and similar proteins
- smart00409
Location:3866 → 3943
- IG; Immunoglobulin
- smart00410
Location:3957 → 4032
- IG_like; Immunoglobulin like
- cd00063
Location:4672 → 4757
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd13239
Location:6070 → 6194
- PH_Obscurin; Obscurin pleckstrin homology (PH) domain
- pfam07679
Location:9 → 98
- I-set; Immunoglobulin I-set domain
- cd00096
Location:891 → 893
- Ig; Ig strand A [structural motif]
- cd20971
Location:6202 → 6292
- IgI_1_Titin-A168_like; First immunoglobulin-like domains A168 within the A-band segment of human cardiac titin, and similar domains; a member of the I-set of IgSF domains
- cl02571
Location:5885 → 6061
- RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
- cl11960
Location:891 → 972
- Ig; Immunoglobulin domain