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STRIP2 striatin interacting protein 2 [ Canis lupus familiaris (dog) ]

Gene ID: 482261, updated on 5-Mar-2024

Summary

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Official Symbol
STRIP2provided by VGNC
Official Full Name
striatin interacting protein 2provided by VGNC
Primary source
VGNC:VGNC:46944
See related
Ensembl:ENSCAFG00845020214
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
FAM40B
Orthologs
human mouse all
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Genomic context

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See STRIP2 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
21
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 14 NC_051818.1 (7056790..7105827, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 14 NC_006596.4 (6978676..7027694, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 14 NC_049235.1 (7148709..7197749, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 14 NC_049274.1 (7261989..7311030, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 14 NC_049755.1 (7004097..7053099, complement)

Chromosome 14 - NC_051818.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene nuclear respiratory factor 1 Neighboring gene small lysine rich protein 1 Neighboring gene adenosylhomocysteinase like 2 Neighboring gene 60S ribosomal protein L29-like Neighboring gene 60S ribosomal protein L12-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
striatin-interacting protein 2
Names
family with sequence similarity 40, member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051818.1 Reference ROS_Cfam_1.0

    Range
    7056790..7105827 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038686164.1 → XP_038542092.1  striatin-interacting protein 2

    UniProtKB/TrEMBL
    A0A8C0LCB8, A0A8C0YTB4, E2RJF2
    Related
    ENSCAFP00845027894.1, ENSCAFT00845035654.1
    Conserved Domains (2) summary
    pfam07923
    Location:49 → 291
    N1221; N1221-like protein
    pfam11882
    Location:456 → 782
    DUF3402; Domain of unknown function (DUF3402)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049274.1 Alternate UMICH_Zoey_3.1

    Range
    7261989..7311030 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038494249.1 → XP_038350177.1  striatin-interacting protein 2

    Conserved Domains (2) summary
    pfam07923
    Location:49 → 291
    N1221; N1221-like protein
    pfam11882
    Location:456 → 782
    DUF3402; Domain of unknown function (DUF3402)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049755.1 Alternate UNSW_CanFamBas_1.0

    Range
    7004097..7053099 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038620478.1 → XP_038476406.1  striatin-interacting protein 2

    Conserved Domains (2) summary
    pfam07923
    Location:49 → 291
    N1221; N1221-like protein
    pfam11882
    Location:456 → 782
    DUF3402; Domain of unknown function (DUF3402)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049235.1 Alternate UU_Cfam_GSD_1.0

    Range
    7148709..7197749 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038556544.1 → XP_038412472.1  striatin-interacting protein 2

    UniProtKB/TrEMBL
    A0A8C0LCB8, A0A8C0YTB4, E2RJF2
    Conserved Domains (2) summary
    pfam07923
    Location:49 → 291
    N1221; N1221-like protein
    pfam11882
    Location:456 → 782
    DUF3402; Domain of unknown function (DUF3402)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006596.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    6978676..7027694 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_843910.4 → XP_849003.1  striatin-interacting protein 2

    UniProtKB/TrEMBL
    A0A8C0LCB8, A0A8C0YTB4, E2RJF2
    Conserved Domains (2) summary
    pfam07923
    Location:49 → 291
    N1221; N1221-like protein
    pfam11882
    Location:456 → 782
    DUF3402; Domain of unknown function (DUF3402)
Nucleotide Protein
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