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OR9S6 olfactory receptor family 9 subfamily S member 6 [ Canis lupus familiaris (dog) ]

Gene ID: 486190, updated on 22-Jan-2024

Summary

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Official Symbol
OR9S6provided by VGNC
Official Full Name
olfactory receptor family 9 subfamily S member 6provided by VGNC
Primary source
VGNC:VGNC:98726
See related
Ensembl:ENSCAFG00845030469
Gene type
protein coding
RefSeq status
INFERRED
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Summary
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
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Genomic context

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See OR9S6 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
2
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 25 NC_051829.1 (50455225..50456825)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 25 NC_006607.4 (50553526..50554476)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 25 NC_049246.1 (50335612..50336562)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 25 NC_049285.1 (50330923..50331873)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 25 NC_049766.1 (50107844..50108794)

Chromosome 25 - NC_051829.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 6 subfamily B member 2 Neighboring gene olfactory receptor family 9 subfamily S member 22 Neighboring gene uncharacterized LOC111092359 Neighboring gene olfactory receptor 12-like Neighboring gene olfactory receptor family 9 subfamily S member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables odorant binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables olfactory receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sensory perception of smell IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
olfactory receptor family 9 subfamily S member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001388751.1 → NP_001375680.1  olfactory receptor family 9 subfamily S member 6

    Status: INFERRED

    Source sequence(s)
    JAAUVH010000302
    UniProtKB/TrEMBL
    A0A8C0NBP1, A0A8C0TH54, A0A8I3QPD5
    Related
    ENSCAFP00845042459.1, ENSCAFT00845054052.1
    Conserved Domains (1) summary
    cd15419
    Location:30 → 308
    7tmA_OR9K2-like; olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051829.1 Reference ROS_Cfam_1.0

    Range
    50455225..50456825
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038434569.1 → XP_038290497.1  olfactory receptor family 9 subfamily S member 6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NBP1, A0A8C0TH54, A0A8I3QPD5
    Conserved Domains (1) summary
    cd15419
    Location:30 → 308
    7tmA_OR9K2-like; olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049285.1 Alternate UMICH_Zoey_3.1

    Range
    50330923..50331873
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049766.1 Alternate UNSW_CanFamBas_1.0

    Range
    50107844..50108794
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049246.1 Alternate UU_Cfam_GSD_1.0

    Range
    50335612..50336562
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006607.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    50553526..50554476
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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