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MFSD13A major facilitator superfamily domain containing 13A [ Canis lupus familiaris (dog) ]

Gene ID: 486862, updated on 5-Mar-2024

Summary

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Official Symbol
MFSD13Aprovided by VGNC
Official Full Name
major facilitator superfamily domain containing 13Aprovided by VGNC
Primary source
VGNC:VGNC:43199
See related
Ensembl:ENSCAFG00845024507
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
TMEM180
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 28
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 28 NC_051832.1 (15431191..15445043)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 28 NC_006610.4 (15129534..15143328)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 28 NC_049249.1 (15147962..15161727)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 28 NC_049288.1 (14976208..14989992)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 28 NC_049769.1 (15015348..15029143)

Chromosome 28 - NC_051832.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106557960 Neighboring gene chromosome 28 C10orf95 homolog Neighboring gene microRNA mir-146b Neighboring gene actin related protein 1A Neighboring gene SUFU negative regulator of hedgehog signaling Neighboring gene uncharacterized LOC111093060

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
transmembrane protein 180

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051832.1 Reference ROS_Cfam_1.0

    Range
    15431191..15445043
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038440415.1 → XP_038296343.1  transmembrane protein 180 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KD30, A0A8C0PBZ9, A0A8I3PM47, A0A8I3PMX6, A0A8P0NW93
    Related
    ENSCAFP00845033990.1, ENSCAFT00845043383.1
    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A

  2. XM_038440419.1 → XP_038296347.1  transmembrane protein 180 isoform X2

    Conserved Domains (1) summary
    cl28910
    Location:17 → 430
    MFS; Major Facilitator Superfamily

  3. XM_038440418.1 → XP_038296346.1  transmembrane protein 180 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KD30, A0A8C0PBZ9, A0A8I3PM47, A0A8I3PMX6, A0A8P0NW93
    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A

  4. XM_038440416.1 → XP_038296344.1  transmembrane protein 180 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KD30, A0A8C0PBZ9, A0A8I3PM47, A0A8I3PMX6, A0A8P0NW93
    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A

  5. XM_038440417.1 → XP_038296345.1  transmembrane protein 180 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KD30, A0A8C0PBZ9, A0A8I3PM47, A0A8I3PMX6, A0A8P0NW93
    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049288.1 Alternate UMICH_Zoey_3.1

    Range
    14976208..14989992
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038515037.1 → XP_038370965.1  transmembrane protein 180 isoform X1

    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A

  2. XM_038515041.1 → XP_038370969.1  transmembrane protein 180 isoform X2

    Conserved Domains (1) summary
    cl28910
    Location:17 → 430
    MFS; Major Facilitator Superfamily

  3. XM_038515040.1 → XP_038370968.1  transmembrane protein 180 isoform X1

    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A

  4. XM_038515038.1 → XP_038370966.1  transmembrane protein 180 isoform X1

    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A

  5. XM_038515039.1 → XP_038370967.1  transmembrane protein 180 isoform X1

    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049769.1 Alternate UNSW_CanFamBas_1.0

    Range
    15015348..15029143
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038642826.1 → XP_038498754.1  transmembrane protein 180 isoform X1

    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A

  2. XM_038642830.1 → XP_038498758.1  transmembrane protein 180 isoform X2

    Conserved Domains (1) summary
    cl28910
    Location:17 → 430
    MFS; Major Facilitator Superfamily

  3. XM_038642829.1 → XP_038498757.1  transmembrane protein 180 isoform X1

    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A

  4. XM_038642827.1 → XP_038498755.1  transmembrane protein 180 isoform X1

    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A

  5. XM_038642828.1 → XP_038498756.1  transmembrane protein 180 isoform X1

    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049249.1 Alternate UU_Cfam_GSD_1.0

    Range
    15147962..15161727
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038578642.1 → XP_038434570.1  transmembrane protein 180 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KD30, A0A8C0PBZ9, A0A8I3PM47, A0A8I3PMX6, A0A8P0NW93
    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A

  2. XM_038578646.1 → XP_038434574.1  transmembrane protein 180 isoform X2

    Conserved Domains (1) summary
    cl28910
    Location:17 → 430
    MFS; Major Facilitator Superfamily

  3. XM_038578645.1 → XP_038434573.1  transmembrane protein 180 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KD30, A0A8C0PBZ9, A0A8I3PM47, A0A8I3PMX6, A0A8P0NW93
    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A

  4. XM_038578643.1 → XP_038434571.1  transmembrane protein 180 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KD30, A0A8C0PBZ9, A0A8I3PM47, A0A8I3PMX6, A0A8P0NW93
    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A

  5. XM_038578644.1 → XP_038434572.1  transmembrane protein 180 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KD30, A0A8C0PBZ9, A0A8I3PM47, A0A8I3PMX6, A0A8P0NW93
    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006610.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    15129534..15143328
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_543992.6 → XP_543992.2  transmembrane protein 180 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KD30, A0A8C0PBZ9, A0A8I3PM47, A0A8I3PMX6, A0A8P0NW93
    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A

  2. XM_022412090.2 → XP_022267798.1  transmembrane protein 180 isoform X2

    Conserved Domains (1) summary
    cl28910
    Location:17 → 430
    MFS; Major Facilitator Superfamily

  3. XM_014108885.3 → XP_013964360.1  transmembrane protein 180 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KD30, A0A8C0PBZ9, A0A8I3PM47, A0A8I3PMX6, A0A8P0NW93
    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A

  4. XM_022412088.2 → XP_022267796.1  transmembrane protein 180 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KD30, A0A8C0PBZ9, A0A8I3PM47, A0A8I3PMX6, A0A8P0NW93
    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A

  5. XM_022412089.2 → XP_022267797.1  transmembrane protein 180 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KD30, A0A8C0PBZ9, A0A8I3PM47, A0A8I3PMX6, A0A8P0NW93
    Conserved Domains (1) summary
    cd17481
    Location:17 → 500
    MFS_MFSD13A; Major facilitator superfamily domain containing 13A
Nucleotide Protein
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