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ESM1 endothelial cell specific molecule 1 [ Canis lupus familiaris (dog) ]

Gene ID: 489201, updated on 5-Mar-2024

Summary

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Official Symbol
ESM1provided by VGNC
Official Full Name
endothelial cell specific molecule 1provided by VGNC
Primary source
VGNC:VGNC:40474
See related
Ensembl:ENSCAFG00845011480
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 4 NC_051808.1 (61080983..61090554)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 4 NC_006586.4 (60356504..60366079)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 4 NC_049225.1 (61505909..61515486)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 4 NC_049264.1 (60861044..60870610)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 4 NC_049745.1 (60987827..60997398)

Chromosome 4 - NC_051808.1Genomic Context describing neighboring genes Neighboring gene sperm-associated acrosin inhibitor-like Neighboring gene serine peptidase inhibitor Kazal type 13 Neighboring gene granzyme K Neighboring gene ATP synthase-coupling factor 6, mitochondrial-like Neighboring gene uncharacterized LOC119871534 Neighboring gene chondroitin sulfate proteoglycan family member 4B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endothelial cell-specific molecule 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051808.1 Reference ROS_Cfam_1.0

    Range
    61080983..61090554
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038663706.1 → XP_038519634.1  endothelial cell-specific molecule 1

    UniProtKB/TrEMBL
    A0A8C0LFI3, A0A8C0LY83, A0A8C0QBA2, A0A8I3NHV3
    Related
    ENSCAFP00845015954.1, ENSCAFT00845020353.1
    Conserved Domains (1) summary
    pfam00219
    Location:29 → 84
    IGFBP; Insulin-like growth factor binding protein

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049264.1 Alternate UMICH_Zoey_3.1

    Range
    60861044..60870610
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038474004.1 → XP_038329932.1  endothelial cell-specific molecule 1

    Conserved Domains (1) summary
    pfam00219
    Location:29 → 84
    IGFBP; Insulin-like growth factor binding protein

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049745.1 Alternate UNSW_CanFamBas_1.0

    Range
    60987827..60997398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038599396.1 → XP_038455324.1  endothelial cell-specific molecule 1

    Conserved Domains (1) summary
    pfam00219
    Location:29 → 84
    IGFBP; Insulin-like growth factor binding protein

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049225.1 Alternate UU_Cfam_GSD_1.0

    Range
    61505909..61515486
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038535101.1 → XP_038391029.1  endothelial cell-specific molecule 1

    UniProtKB/TrEMBL
    A0A8C0LFI3, A0A8C0LY83, A0A8C0QBA2, A0A8I3NHV3
    Conserved Domains (1) summary
    pfam00219
    Location:29 → 84
    IGFBP; Insulin-like growth factor binding protein

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006586.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    60356504..60366079
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_546319.7 → XP_546319.2  endothelial cell-specific molecule 1

    UniProtKB/TrEMBL
    A0A8C0LFI3, A0A8C0LY83, A0A8C0QBA2, A0A8I3NHV3
    Conserved Domains (1) summary
    pfam00219
    Location:29 → 84
    IGFBP; Insulin-like growth factor binding protein
Nucleotide Protein
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