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CLDN7 claudin 7 [ Canis lupus familiaris (dog) ]

Gene ID: 489466, updated on 5-Mar-2024

Summary

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Official Symbol
CLDN7provided by VGNC
Official Full Name
claudin 7provided by VGNC
Primary source
VGNC:VGNC:53320
See related
Ensembl:ENSCAFG00845020640
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See CLDN7 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 5 NC_051809.1 (32329561..32331372, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 5 NC_006587.4 (32362233..32364044, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 5 NC_049226.1 (32430822..32432633, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 5 NC_049265.1 (32294842..32296653, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 5 NC_049746.1 (32253867..32255678, complement)

Chromosome 5 - NC_051809.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111095875 Neighboring gene CTD nuclear envelope phosphatase 1 Neighboring gene elongator acetyltransferase complex subunit 5 Neighboring gene solute carrier family 2 member 4 Neighboring gene Y-box binding protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
claudin-7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051809.1 Reference ROS_Cfam_1.0

    Range
    32329561..32331372 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038665370.1 → XP_038521298.1  claudin-7

    UniProtKB/TrEMBL
    A0A8C0KCA2, A0A8C0N749, A0A8I3PKL1
    Related
    ENSCAFP00845028495.1, ENSCAFT00845036407.1
    Conserved Domains (1) summary
    pfam00822
    Location:4 → 182
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049265.1 Alternate UMICH_Zoey_3.1

    Range
    32294842..32296653 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038475479.1 → XP_038331407.1  claudin-7

    Conserved Domains (1) summary
    pfam00822
    Location:4 → 182
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049746.1 Alternate UNSW_CanFamBas_1.0

    Range
    32253867..32255678 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038600829.1 → XP_038456757.1  claudin-7

    Conserved Domains (1) summary
    pfam00822
    Location:4 → 182
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049226.1 Alternate UU_Cfam_GSD_1.0

    Range
    32430822..32432633 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038536646.1 → XP_038392574.1  claudin-7

    UniProtKB/TrEMBL
    A0A8C0KCA2, A0A8C0N749, A0A8I3PKL1
    Conserved Domains (1) summary
    pfam00822
    Location:4 → 182
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006587.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    32362233..32364044 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_546584.5 → XP_546584.3  claudin-7

    UniProtKB/TrEMBL
    A0A8C0KCA2, A0A8C0N749, A0A8I3PKL1
    Conserved Domains (1) summary
    pfam00822
    Location:4 → 182
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein
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