SEPTIN1 septin 1 [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: SEPTIN1provided by VGNC
Official Full Name: septin 1provided by VGNC
Primary source: VGNC:VGNC:46010
See related: Ensembl:ENSCAFG00845014164
Gene type: protein coding
RefSeq status: MODEL
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as: SEPT1
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 6

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	6	NC_051810.1 (17846389..17850406)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	6	NC_006588.4 (19289544..19293553)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	6	NC_049227.1 (17877697..17881714)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	6	NC_049266.1 (17646593..17650610)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	6	NC_049747.1 (17562034..17566041)

Chromosome 6 - NC_051810.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables GTP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables GTPase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables molecular adaptor activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in cytoskeleton-dependent cytokinesis	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of exocytosis	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cell division site	IEA Inferred from Electronic Annotation more info	PubMed
located_in microtubule cytoskeleton	IEA Inferred from Electronic Annotation more info	PubMed
part_of septin complex	IEA Inferred from Electronic Annotation more info	PubMed
located_in septin ring	IEA Inferred from Electronic Annotation more info	PubMed
located_in synaptic vesicle	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: septin-1

XP_005621345.1

EC 3.1.5.1

XP_022275567.1

EC 3.1.5.1

XP_038334500.1

EC 3.1.5.1

XP_038334501.1

EC 3.1.5.1

XP_038395743.1

EC 3.1.5.1

XP_038395744.1

EC 3.1.5.1

XP_038459823.1

EC 3.1.5.1

XP_038459824.1

EC 3.1.5.1

XP_038524548.1

EC 3.1.5.1

XP_038524549.1

EC 3.1.5.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051810.1 Reference ROS_Cfam_1.0

Range

17846389..17850406

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038668621.1 → XP_038524549.1 septin-1 isoform X2

Conserved Domains (1) summary

cl40481
Location:25 → 253

YlqF_related_GTPase; Circularly permuted YlqF-related GTPases
XM_038668620.1 → XP_038524548.1 septin-1 isoform X1

UniProtKB/TrEMBL

A0A8C0KZI6, A0A8C0M3U6, A0A8C0SKS0, A0A8I3NN77, A0A8P0NHZ2

Related

ENSCAFP00845020054.1, ENSCAFT00845025458.1

Conserved Domains (1) summary

pfam00735
Location:25 → 298

Septin

Alternate UMICH_Zoey_3.1

Genomic

NC_049266.1 Alternate UMICH_Zoey_3.1

Range

17646593..17650610

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038478573.1 → XP_038334501.1 septin-1 isoform X2

Conserved Domains (1) summary

cl40481
Location:25 → 253

YlqF_related_GTPase; Circularly permuted YlqF-related GTPases
XM_038478572.1 → XP_038334500.1 septin-1 isoform X1

Conserved Domains (1) summary

pfam00735
Location:25 → 298

Septin

Alternate UNSW_CanFamBas_1.0

Genomic

NC_049747.1 Alternate UNSW_CanFamBas_1.0

Range

17562034..17566041

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038603896.1 → XP_038459824.1 septin-1 isoform X2

Conserved Domains (1) summary

cl40481
Location:25 → 253

YlqF_related_GTPase; Circularly permuted YlqF-related GTPases
XM_038603895.1 → XP_038459823.1 septin-1 isoform X1

Conserved Domains (1) summary

pfam00735
Location:25 → 298

Septin

Alternate UU_Cfam_GSD_1.0

Genomic

NC_049227.1 Alternate UU_Cfam_GSD_1.0

Range

17877697..17881714

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038539816.1 → XP_038395744.1 septin-1 isoform X2

Conserved Domains (1) summary

cl40481
Location:25 → 253

YlqF_related_GTPase; Circularly permuted YlqF-related GTPases
XM_038539815.1 → XP_038395743.1 septin-1 isoform X1

UniProtKB/TrEMBL

A0A8C0KZI6, A0A8C0M3U6, A0A8C0SKS0, A0A8I3NN77, A0A8P0NHZ2

Conserved Domains (1) summary

pfam00735
Location:25 → 298

Septin

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

Range

19289544..19293553

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_022419859.2 → XP_022275567.1 septin-1 isoform X2

Conserved Domains (1) summary

cl40481
Location:25 → 253

YlqF_related_GTPase; Circularly permuted YlqF-related GTPases
XM_005621288.4 → XP_005621345.1 septin-1 isoform X1

UniProtKB/TrEMBL

A0A8C0KZI6, A0A8C0M3U6, A0A8C0SKS0, A0A8I3NN77, A0A8P0NHZ2

Conserved Domains (1) summary

pfam00735
Location:25 → 298

Septin