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CLEC14A C-type lectin domain containing 14A [ Canis lupus familiaris (dog) ]

Gene ID: 490660, updated on 5-Mar-2024

Summary

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Official Symbol
CLEC14Aprovided by VGNC
Official Full Name
C-type lectin domain containing 14Aprovided by VGNC
Primary source
VGNC:VGNC:39327
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See CLEC14A in Genome Data Viewer
Location:
chromosome: 8
Exon count:
1
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 8 NC_051812.1 (16725500..16728851, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 8 NC_006590.4 (16414773..16418124, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 8 NC_049229.1 (16777896..16781247, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 8 NC_049268.1 (16419013..16422364, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 8 NC_049749.1 (16477258..16480609, complement)

Chromosome 8 - NC_051812.1Genomic Context describing neighboring genes Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene somatostatin receptor 1 Neighboring gene uncharacterized LOC119872849 Neighboring gene 40S ribosomal protein S6-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables extracellular matrix protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 14 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051812.1 Reference ROS_Cfam_1.0

    Range
    16725500..16728851 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038673484.1 → XP_038529412.1  C-type lectin domain family 14 member A

    UniProtKB/TrEMBL
    A0A8C0PTH4, A0A8C0RB64
    Conserved Domains (2) summary
    pfam14670
    Location:255 → 287
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl02432
    Location:32 → 175
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049268.1 Alternate UMICH_Zoey_3.1

    Range
    16419013..16422364 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038483104.1 → XP_038339032.1  C-type lectin domain family 14 member A

    Conserved Domains (2) summary
    pfam14670
    Location:255 → 287
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl02432
    Location:32 → 175
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049749.1 Alternate UNSW_CanFamBas_1.0

    Range
    16477258..16480609 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038608674.1 → XP_038464602.1  C-type lectin domain family 14 member A

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049229.1 Alternate UU_Cfam_GSD_1.0

    Range
    16777896..16781247 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038544554.1 → XP_038400482.1  C-type lectin domain family 14 member A

    UniProtKB/TrEMBL
    A0A8C0PTH4, A0A8C0RB64
    Conserved Domains (2) summary
    pfam14670
    Location:255 → 287
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl02432
    Location:32 → 175
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    16414773..16418124 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005623350.4 → XP_005623407.1  C-type lectin domain family 14 member A

    UniProtKB/TrEMBL
    A0A8C0PTH4, A0A8C0RB64
    Conserved Domains (2) summary
    pfam14670
    Location:255 → 287
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl02432
    Location:32 → 175
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
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