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SLC13A2 solute carrier family 13 member 2 [ Canis lupus familiaris (dog) ]

Gene ID: 491167, updated on 5-Mar-2024

Summary

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Official Symbol
SLC13A2provided by VGNC
Official Full Name
solute carrier family 13 member 2provided by VGNC
Primary source
VGNC:VGNC:46228
See related
Ensembl:ENSCAFG00845007453
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See SLC13A2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (43508195..43532099)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (41845952..41869885)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (42661122..42685125)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (42291351..42315214)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (42583710..42607627)

Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene vitronectin Neighboring gene sterile alpha and TIR motif containing 1 Neighboring gene solute carrier family 46 member 1 Neighboring gene uncharacterized LOC119873325 Neighboring gene forkhead box N1 Neighboring gene unc-119 lipid binding chaperone

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic anion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 13 member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051813.1 Reference ROS_Cfam_1.0

    Range
    43508195..43532099
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038677456.1 → XP_038533384.1  solute carrier family 13 member 2

    UniProtKB/TrEMBL
    A0A8C0N5G5, A0A8I3N5S7, A0A8P0SN15
    Related
    ENSCAFP00845010222.1, ENSCAFT00845013142.1
    Conserved Domains (1) summary
    cl21473
    Location:6 → 563
    ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049269.1 Alternate UMICH_Zoey_3.1

    Range
    42291351..42315214
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038486395.1 → XP_038342323.1  solute carrier family 13 member 2

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

    Range
    42583710..42607627
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038612199.1 → XP_038468127.1  solute carrier family 13 member 2

    Conserved Domains (1) summary
    cl21473
    Location:6 → 563
    ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

    Range
    42661122..42685125
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038548233.1 → XP_038404161.1  solute carrier family 13 member 2

    UniProtKB/TrEMBL
    A0A8C0TCV5, A0A8P0SN15

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    41845952..41869885
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_548287.6 → XP_548287.1  solute carrier family 13 member 2

    UniProtKB/TrEMBL
    A0A8C0TCV5, A0A8P0SN15
    Conserved Domains (1) summary
    cl21473
    Location:6 → 563
    ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...
Nucleotide Protein
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