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C1H19orf47 chromosome 1 C19orf47 homolog [ Canis lupus familiaris (dog) ]

Gene ID: 611479, updated on 5-Mar-2024

Summary

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Official Symbol
C1H19orf47provided by VGNC
Official Full Name
chromosome 1 C19orf47 homologprovided by VGNC
Primary source
VGNC:VGNC:52508
See related
Ensembl:ENSCAFG00845003809
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See C1H19orf47 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (113923661..113951448)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (112727217..112754539)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (114109416..114136760)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (113482913..113510417)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (113115411..113142958)

Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene homeodomain interacting protein kinase 4 Neighboring gene phospholipase D family member 3 Neighboring gene AKT serine/threonine kinase 2 Neighboring gene cyclin P

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein C19orf47 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051805.1 Reference ROS_Cfam_1.0

    Range
    113923661..113951448
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038656965.1 → XP_038512893.1  uncharacterized protein C19orf47 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0KPK2
    Conserved Domains (2) summary
    pfam17740
    Location:117 → 368
    DUF5577; Family of unknown function (DUF5577)
    pfam18017
    Location:25 → 108
    SAM_4; SAM domain (Sterile alpha motif)

  2. XM_038656966.1 → XP_038512894.1  uncharacterized protein C19orf47 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8C0KRQ6
    Related
    ENSCAFP00845005440.1, ENSCAFT00845006829.1
    Conserved Domains (2) summary
    pfam17740
    Location:117 → 406
    DUF5577; Family of unknown function (DUF5577)
    pfam18017
    Location:25 → 108
    SAM_4; SAM domain (Sterile alpha motif)

  3. XM_038656967.1 → XP_038512895.1  uncharacterized protein C19orf47 homolog isoform X3

    UniProtKB/TrEMBL
    A0A8C0KPK2, A0A8I3MU68
    Related
    ENSCAFP00845005453.1, ENSCAFT00845006845.1
    Conserved Domains (2) summary
    pfam17740
    Location:117 → 363
    DUF5577; Family of unknown function (DUF5577)
    pfam18017
    Location:25 → 108
    SAM_4; SAM domain (Sterile alpha motif)

  4. XM_038656968.1 → XP_038512896.1  uncharacterized protein C19orf47 homolog isoform X4

    UniProtKB/TrEMBL
    A0A8C0KPK2
    Conserved Domains (2) summary
    pfam17740
    Location:117 → 362
    DUF5577; Family of unknown function (DUF5577)
    pfam18017
    Location:25 → 108
    SAM_4; SAM domain (Sterile alpha motif)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049261.1 Alternate UMICH_Zoey_3.1

    Range
    113482913..113510417
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038468127.1 → XP_038324055.1  uncharacterized protein C19orf47 homolog isoform X1

    Conserved Domains (2) summary
    pfam17740
    Location:117 → 368
    DUF5577; Family of unknown function (DUF5577)
    pfam18017
    Location:25 → 108
    SAM_4; SAM domain (Sterile alpha motif)

  2. XM_038468128.1 → XP_038324056.1  uncharacterized protein C19orf47 homolog isoform X2

    Conserved Domains (2) summary
    pfam17740
    Location:117 → 406
    DUF5577; Family of unknown function (DUF5577)
    pfam18017
    Location:25 → 108
    SAM_4; SAM domain (Sterile alpha motif)

  3. XM_038468129.1 → XP_038324057.1  uncharacterized protein C19orf47 homolog isoform X3

    Conserved Domains (2) summary
    pfam17740
    Location:117 → 363
    DUF5577; Family of unknown function (DUF5577)
    pfam18017
    Location:25 → 108
    SAM_4; SAM domain (Sterile alpha motif)

  4. XM_038468130.1 → XP_038324058.1  uncharacterized protein C19orf47 homolog isoform X4

    Conserved Domains (2) summary
    pfam17740
    Location:117 → 362
    DUF5577; Family of unknown function (DUF5577)
    pfam18017
    Location:25 → 108
    SAM_4; SAM domain (Sterile alpha motif)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

    Range
    113115411..113142958
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038593142.1 → XP_038449070.1  uncharacterized protein C19orf47 homolog isoform X1

  2. XM_038593143.1 → XP_038449071.1  uncharacterized protein C19orf47 homolog isoform X2

  3. XM_038593144.1 → XP_038449072.1  uncharacterized protein C19orf47 homolog isoform X3

  4. XM_038593145.1 → XP_038449073.1  uncharacterized protein C19orf47 homolog isoform X4

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

    Range
    114109416..114136760
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038528871.1 → XP_038384799.1  uncharacterized protein C19orf47 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0KPK2

  2. XM_038528872.1 → XP_038384800.1  uncharacterized protein C19orf47 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8C0KRQ6

  3. XM_038528873.1 → XP_038384801.1  uncharacterized protein C19orf47 homolog isoform X3

    UniProtKB/TrEMBL
    A0A8C0KPK2, A0A8P0TRI0

  4. XM_038528874.1 → XP_038384802.1  uncharacterized protein C19orf47 homolog isoform X4

    UniProtKB/TrEMBL
    A0A8C0KPK2

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    112727217..112754539
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022425648.2 → XP_022281356.1  uncharacterized protein C19orf47 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0KPK2
    Conserved Domains (1) summary
    cd09531
    Location:32 → 96
    SAM_CS047; SAM domain of CS047 subfamily

  2. XM_005616565.4 → XP_005616622.1  uncharacterized protein C19orf47 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8C0KRQ6
    Conserved Domains (1) summary
    cd09531
    Location:32 → 96
    SAM_CS047; SAM domain of CS047 subfamily

  3. XM_861894.6 → XP_866987.3  uncharacterized protein C19orf47 homolog isoform X3

    UniProtKB/TrEMBL
    A0A8C0KPK2, A0A8P0TRI0
    Conserved Domains (1) summary
    cd09531
    Location:32 → 96
    SAM_CS047; SAM domain of CS047 subfamily

  4. XM_005616567.4 → XP_005616624.1  uncharacterized protein C19orf47 homolog isoform X4

    UniProtKB/TrEMBL
    A0A8C0KPK2
    Conserved Domains (1) summary
    cd09531
    Location:32 → 96
    SAM_CS047; SAM domain of CS047 subfamily
Nucleotide Protein
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