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RALGAPA1 Ral GTPase activating protein catalytic subunit alpha 1 [ Canis lupus familiaris (dog) ]

Gene ID: 612841, updated on 5-Mar-2024

Summary

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Official Symbol
RALGAPA1provided by VGNC
Official Full Name
Ral GTPase activating protein catalytic subunit alpha 1provided by VGNC
Primary source
VGNC:VGNC:111687
See related
Ensembl:ENSCAFG00845002236
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
GARNL1
Orthologs
human mouse all
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Genomic context

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See RALGAPA1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
45
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 8 NC_051812.1 (14327816..14570610, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 8 NC_006590.4 (14017673..14259618, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 8 NC_049229.1 (14384204..14626322, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 8 NC_049268.1 (14028892..14271002, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 8 NC_049749.1 (14094489..14336412, complement)

Chromosome 8 - NC_051812.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111097206 Neighboring gene INSM transcriptional repressor 2 Neighboring gene 60S ribosomal protein L23a-like Neighboring gene U6 spliceosomal RNA Neighboring gene U12 minor spliceosomal RNA Neighboring gene small ubiquitin-related modifier 2-like Neighboring gene 60S ribosomal protein L36-like Neighboring gene BRMS1 like transcriptional repressor Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of small GTPase mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ral GTPase-activating protein subunit alpha-1
Names
GTPase activating Rap/RanGAP domain-like 1
Ral GTPase activating protein catalytic alpha subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051812.1 Reference ROS_Cfam_1.0

    Range
    14327816..14570610 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038673432.1 → XP_038529360.1  ral GTPase-activating protein subunit alpha-1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0RCS5
    Conserved Domains (1) summary
    pfam02145
    Location:2334 → 2510
    Rap_GAP; Rap/ran-GAP

  2. XM_038673430.1 → XP_038529358.1  ral GTPase-activating protein subunit alpha-1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0RCS5
    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  3. XM_038673429.1 → XP_038529357.1  ral GTPase-activating protein subunit alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0RCS5
    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  4. XM_038673437.1 → XP_038529365.1  ral GTPase-activating protein subunit alpha-1 isoform X7

    UniProtKB/TrEMBL
    A0A8C0RCS5
    Related
    ENSCAFP00845003164.1, ENSCAFT00845003964.1
    Conserved Domains (1) summary
    pfam02145
    Location:2287 → 2463
    Rap_GAP; Rap/ran-GAP

  5. XM_038673433.1 → XP_038529361.1  ral GTPase-activating protein subunit alpha-1 isoform X5

    UniProtKB/TrEMBL
    A0A8C0RCS5
    Conserved Domains (1) summary
    pfam02145
    Location:2314 → 2490
    Rap_GAP; Rap/ran-GAP

  6. XM_038673431.1 → XP_038529359.1  ral GTPase-activating protein subunit alpha-1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0RCS5
    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  7. XM_038673438.1 → XP_038529366.1  ral GTPase-activating protein subunit alpha-1 isoform X8

    UniProtKB/TrEMBL
    A0A8C0MD20
    Related
    ENSCAFP00845003409.1, ENSCAFT00845004274.1
    Conserved Domains (1) summary
    pfam02145
    Location:1901 → 2077
    Rap_GAP; Rap/ran-GAP

  8. XM_038673440.1 → XP_038529368.1  ral GTPase-activating protein subunit alpha-1 isoform X10

    UniProtKB/TrEMBL
    A0A8I3MP06
    Related
    ENSCAFP00845003185.1, ENSCAFT00845003988.1
    Conserved Domains (1) summary
    pfam02145
    Location:1874 → 2050
    Rap_GAP; Rap/ran-GAP

  9. XM_038673439.1 → XP_038529367.1  ral GTPase-activating protein subunit alpha-1 isoform X9

    UniProtKB/TrEMBL
    A0A8I3MP06
    Conserved Domains (1) summary
    pfam02145
    Location:1874 → 2050
    Rap_GAP; Rap/ran-GAP

  10. XM_038673441.1 → XP_038529369.1  ral GTPase-activating protein subunit alpha-1 isoform X11

    UniProtKB/TrEMBL
    A0A8C0M9S8, A0A8I3MFL0
    Conserved Domains (1) summary
    pfam02145
    Location:1827 → 2003
    Rap_GAP; Rap/ran-GAP

  11. XM_038673443.1 → XP_038529371.1  ral GTPase-activating protein subunit alpha-1 isoform X13

    UniProtKB/TrEMBL
    A0A8C0M9S8, A0A8I3MFL0
    Related
    ENSCAFP00845003206.1, ENSCAFT00845004011.1
    Conserved Domains (1) summary
    pfam02145
    Location:1827 → 2003
    Rap_GAP; Rap/ran-GAP

  12. XM_038673442.1 → XP_038529370.1  ral GTPase-activating protein subunit alpha-1 isoform X12

    UniProtKB/TrEMBL
    A0A8C0M9S8, A0A8I3MFL0
    Conserved Domains (1) summary
    pfam02145
    Location:1827 → 2003
    Rap_GAP; Rap/ran-GAP

  13. XM_038673434.1 → XP_038529362.1  ral GTPase-activating protein subunit alpha-1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0MA04, A0A8I3MSH1
    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  14. XM_038673435.1 → XP_038529363.1  ral GTPase-activating protein subunit alpha-1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0MA04, A0A8I3MSH1
    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  15. XM_038673436.1 → XP_038529364.1  ral GTPase-activating protein subunit alpha-1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0MA04, A0A8I3MSH1
    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049268.1 Alternate UMICH_Zoey_3.1

    Range
    14028892..14271002 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038483048.1 → XP_038338976.1  ral GTPase-activating protein subunit alpha-1 isoform X4

  2. XM_038483046.1 → XP_038338974.1  ral GTPase-activating protein subunit alpha-1 isoform X2

    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  3. XM_038483045.1 → XP_038338973.1  ral GTPase-activating protein subunit alpha-1 isoform X1

    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  4. XM_038483053.1 → XP_038338981.1  ral GTPase-activating protein subunit alpha-1 isoform X7

  5. XM_038483049.1 → XP_038338977.1  ral GTPase-activating protein subunit alpha-1 isoform X5

    Conserved Domains (1) summary
    pfam02145
    Location:2314 → 2490
    Rap_GAP; Rap/ran-GAP

  6. XM_038483047.1 → XP_038338975.1  ral GTPase-activating protein subunit alpha-1 isoform X3

    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  7. XM_038483054.1 → XP_038338982.1  ral GTPase-activating protein subunit alpha-1 isoform X8

  8. XM_038483056.1 → XP_038338984.1  ral GTPase-activating protein subunit alpha-1 isoform X10

  9. XM_038483055.1 → XP_038338983.1  ral GTPase-activating protein subunit alpha-1 isoform X9

  10. XM_038483057.1 → XP_038338985.1  ral GTPase-activating protein subunit alpha-1 isoform X11

  11. XM_038483059.1 → XP_038338987.1  ral GTPase-activating protein subunit alpha-1 isoform X13

  12. XM_038483058.1 → XP_038338986.1  ral GTPase-activating protein subunit alpha-1 isoform X12

  13. XM_038483050.1 → XP_038338978.1  ral GTPase-activating protein subunit alpha-1 isoform X6

    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  14. XM_038483051.1 → XP_038338979.1  ral GTPase-activating protein subunit alpha-1 isoform X6

    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  15. XM_038483052.1 → XP_038338980.1  ral GTPase-activating protein subunit alpha-1 isoform X6

    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049749.1 Alternate UNSW_CanFamBas_1.0

    Range
    14094489..14336412 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038608616.1 → XP_038464544.1  ral GTPase-activating protein subunit alpha-1 isoform X4

  2. XM_038608614.1 → XP_038464542.1  ral GTPase-activating protein subunit alpha-1 isoform X2

  3. XM_038608613.1 → XP_038464541.1  ral GTPase-activating protein subunit alpha-1 isoform X1

  4. XM_038608621.1 → XP_038464549.1  ral GTPase-activating protein subunit alpha-1 isoform X7

  5. XM_038608617.1 → XP_038464545.1  ral GTPase-activating protein subunit alpha-1 isoform X5

  6. XM_038608615.1 → XP_038464543.1  ral GTPase-activating protein subunit alpha-1 isoform X3

  7. XM_038608622.1 → XP_038464550.1  ral GTPase-activating protein subunit alpha-1 isoform X8

  8. XM_038608624.1 → XP_038464552.1  ral GTPase-activating protein subunit alpha-1 isoform X10

  9. XM_038608623.1 → XP_038464551.1  ral GTPase-activating protein subunit alpha-1 isoform X9

  10. XM_038608625.1 → XP_038464553.1  ral GTPase-activating protein subunit alpha-1 isoform X11

  11. XM_038608627.1 → XP_038464555.1  ral GTPase-activating protein subunit alpha-1 isoform X13

  12. XM_038608626.1 → XP_038464554.1  ral GTPase-activating protein subunit alpha-1 isoform X12

  13. XM_038608618.1 → XP_038464546.1  ral GTPase-activating protein subunit alpha-1 isoform X6

  14. XM_038608619.1 → XP_038464547.1  ral GTPase-activating protein subunit alpha-1 isoform X6

  15. XM_038608620.1 → XP_038464548.1  ral GTPase-activating protein subunit alpha-1 isoform X6

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049229.1 Alternate UU_Cfam_GSD_1.0

    Range
    14384204..14626322 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038544500.1 → XP_038400428.1  ral GTPase-activating protein subunit alpha-1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0LHI0, A0A8C0T9Y3

  2. XM_038544498.1 → XP_038400426.1  ral GTPase-activating protein subunit alpha-1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LHI0, A0A8C0T9Y3
    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  3. XM_038544497.1 → XP_038400425.1  ral GTPase-activating protein subunit alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LHI0, A0A8C0T9Y3
    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  4. XM_038544506.1 → XP_038400434.1  ral GTPase-activating protein subunit alpha-1 isoform X7

    UniProtKB/TrEMBL
    A0A8C0LHI0, A0A8C0T9Y3

  5. XM_038544501.1 → XP_038400429.1  ral GTPase-activating protein subunit alpha-1 isoform X5

    UniProtKB/TrEMBL
    A0A8C0LHI0, A0A8C0T9Y3
    Conserved Domains (1) summary
    pfam02145
    Location:2314 → 2490
    Rap_GAP; Rap/ran-GAP

  6. XM_038544499.1 → XP_038400427.1  ral GTPase-activating protein subunit alpha-1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0LHI0, A0A8C0T9Y3
    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  7. XM_038544507.1 → XP_038400435.1  ral GTPase-activating protein subunit alpha-1 isoform X8

    UniProtKB/TrEMBL
    A0A8C0TD53

  8. XM_038544509.1 → XP_038400437.1  ral GTPase-activating protein subunit alpha-1 isoform X10

    UniProtKB/TrEMBL
    A0A8I3MP06

  9. XM_038544508.1 → XP_038400436.1  ral GTPase-activating protein subunit alpha-1 isoform X9

    UniProtKB/TrEMBL
    A0A8I3MP06

  10. XM_038544510.1 → XP_038400438.1  ral GTPase-activating protein subunit alpha-1 isoform X11

    UniProtKB/TrEMBL
    A0A8C0TBJ9

  11. XM_038544512.1 → XP_038400440.1  ral GTPase-activating protein subunit alpha-1 isoform X13

    UniProtKB/TrEMBL
    A0A8C0TBJ9

  12. XM_038544511.1 → XP_038400439.1  ral GTPase-activating protein subunit alpha-1 isoform X12

    UniProtKB/TrEMBL
    A0A8C0TBJ9

  13. XM_038544503.1 → XP_038400431.1  ral GTPase-activating protein subunit alpha-1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0TGX5
    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  14. XM_038544504.1 → XP_038400432.1  ral GTPase-activating protein subunit alpha-1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0TGX5
    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  15. XM_038544505.1 → XP_038400433.1  ral GTPase-activating protein subunit alpha-1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0TGX5
    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    14017673..14259618 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038585536.1 → XP_038441464.1  ral GTPase-activating protein subunit alpha-1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0RCS5
    Conserved Domains (1) summary
    pfam02145
    Location:2334 → 2510
    Rap_GAP; Rap/ran-GAP

  2. XM_038585517.1 → XP_038441445.1  ral GTPase-activating protein subunit alpha-1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0RCS5
    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  3. XM_038585507.1 → XP_038441435.1  ral GTPase-activating protein subunit alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0RCS5
    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  4. XM_038585571.1 → XP_038441499.1  ral GTPase-activating protein subunit alpha-1 isoform X7

    UniProtKB/TrEMBL
    A0A8C0RCS5
    Conserved Domains (1) summary
    pfam02145
    Location:2287 → 2463
    Rap_GAP; Rap/ran-GAP

  5. XM_038585544.1 → XP_038441472.1  ral GTPase-activating protein subunit alpha-1 isoform X5

    UniProtKB/TrEMBL
    A0A8C0RCS5
    Conserved Domains (1) summary
    pfam02145
    Location:2314 → 2490
    Rap_GAP; Rap/ran-GAP

  6. XM_038585528.1 → XP_038441456.1  ral GTPase-activating protein subunit alpha-1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0RCS5
    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  7. XM_038585576.1 → XP_038441504.1  ral GTPase-activating protein subunit alpha-1 isoform X8

    UniProtKB/TrEMBL
    A0A8C0MD20
    Conserved Domains (1) summary
    pfam02145
    Location:1901 → 2077
    Rap_GAP; Rap/ran-GAP

  8. XM_038585590.1 → XP_038441518.1  ral GTPase-activating protein subunit alpha-1 isoform X10

    UniProtKB/TrEMBL
    A0A8I3MP06
    Conserved Domains (1) summary
    pfam02145
    Location:1874 → 2050
    Rap_GAP; Rap/ran-GAP

  9. XM_038585582.1 → XP_038441510.1  ral GTPase-activating protein subunit alpha-1 isoform X9

    UniProtKB/TrEMBL
    A0A8I3MP06
    Conserved Domains (1) summary
    pfam02145
    Location:1874 → 2050
    Rap_GAP; Rap/ran-GAP

  10. XM_038585601.1 → XP_038441529.1  ral GTPase-activating protein subunit alpha-1 isoform X11

    UniProtKB/TrEMBL
    A0A8C0M9S8, A0A8I3MFL0
    Conserved Domains (1) summary
    pfam02145
    Location:1827 → 2003
    Rap_GAP; Rap/ran-GAP

  11. XM_038585622.1 → XP_038441550.1  ral GTPase-activating protein subunit alpha-1 isoform X13

    UniProtKB/TrEMBL
    A0A8C0M9S8, A0A8I3MFL0
    Conserved Domains (1) summary
    pfam02145
    Location:1827 → 2003
    Rap_GAP; Rap/ran-GAP

  12. XM_038585611.1 → XP_038441539.1  ral GTPase-activating protein subunit alpha-1 isoform X12

    UniProtKB/TrEMBL
    A0A8C0M9S8, A0A8I3MFL0
    Conserved Domains (1) summary
    pfam02145
    Location:1827 → 2003
    Rap_GAP; Rap/ran-GAP

  13. XM_038585550.1 → XP_038441478.1  ral GTPase-activating protein subunit alpha-1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0MA04, A0A8I3MSH1
    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  14. XM_038585555.1 → XP_038441483.1  ral GTPase-activating protein subunit alpha-1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0MA04, A0A8I3MSH1
    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP

  15. XM_038585561.1 → XP_038441489.1  ral GTPase-activating protein subunit alpha-1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0MA04, A0A8I3MSH1
    Conserved Domains (1) summary
    pfam02145
    Location:2361 → 2537
    Rap_GAP; Rap/ran-GAP
Nucleotide Protein
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