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C1QTNF1 C1q and TNF related 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 711093, updated on 5-Mar-2024

Summary

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Official Symbol
C1QTNF1provided by VGNC
Official Full Name
C1q and TNF related 1provided by VGNC
Primary source
VGNC:VGNC:70311
See related
Ensembl:ENSMMUG00000009504
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (75334918..75372228)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (72828068..72865177)

Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene galectin 3 binding protein Neighboring gene calcium activated nucleotidase 1 Neighboring gene endo-beta-N-acetylglucosaminidase Neighboring gene RNA binding fox-1 homolog 3 Neighboring gene uncharacterized LOC114673198

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
complement C1q tumor necrosis factor-related protein 1
Names
C1q and tumor necrosis factor related protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001266074.1 → NP_001253003.1  complement C1q tumor necrosis factor-related protein 1 precursor

    See identical proteins and their annotated locations for NP_001253003.1

    Status: PROVISIONAL

    Source sequence(s)
    JV045734
    UniProtKB/TrEMBL
    F6YMZ3, G7NH11
    Conserved Domains (2) summary
    pfam01391
    Location:99 → 140
    Collagen; Collagen triple helix repeat (20 copies)
    pfam00386
    Location:147 → 275
    C1q; C1q domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041769.1 Reference Mmul_10 Primary Assembly

    Range
    75334918..75372228
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015120356.2 → XP_014975842.2  complement C1q tumor necrosis factor-related protein 1 isoform X3

    UniProtKB/TrEMBL
    F6YN01, G7NH11
    Conserved Domains (2) summary
    pfam00386
    Location:148 → 276
    C1q; C1q domain
    pfam01391
    Location:99 → 141
    Collagen; Collagen triple helix repeat (20 copies)

  2. XM_015120353.2 → XP_014975839.2  complement C1q tumor necrosis factor-related protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A5F8ARH4
    Related
    ENSMMUP00000080447.1, ENSMMUT00000083473.1
    Conserved Domains (2) summary
    pfam01391
    Location:199 → 240
    Collagen; Collagen triple helix repeat (20 copies)
    pfam00386
    Location:247 → 375
    C1q; C1q domain

  3. XM_015120355.2 → XP_014975841.2  complement C1q tumor necrosis factor-related protein 1 isoform X3

    UniProtKB/TrEMBL
    F6YN01, G7NH11
    Related
    ENSMMUP00000072295.1, ENSMMUT00000085839.1
    Conserved Domains (2) summary
    pfam00386
    Location:148 → 276
    C1q; C1q domain
    pfam01391
    Location:99 → 141
    Collagen; Collagen triple helix repeat (20 copies)

  4. XM_015120354.2 → XP_014975840.2  complement C1q tumor necrosis factor-related protein 1 isoform X2

    UniProtKB/TrEMBL
    G7NH11
    Conserved Domains (2) summary
    pfam00386
    Location:173 → 301
    C1q; C1q domain
    pfam01391
    Location:124 → 166
    Collagen; Collagen triple helix repeat (20 copies)

  5. XM_028835576.1 → XP_028691409.1  complement C1q tumor necrosis factor-related protein 1 isoform X3

    UniProtKB/TrEMBL
    F6YN01, G7NH11
    Related
    ENSMMUP00000012431.4, ENSMMUT00000013263.4
    Conserved Domains (2) summary
    pfam00386
    Location:148 → 276
    C1q; C1q domain
    pfam01391
    Location:99 → 141
    Collagen; Collagen triple helix repeat (20 copies)
Nucleotide Protein
Heading Accession and Version

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