ppargc1b peroxisome proliferator-activated receptor gamma, coactivator 1 beta [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: ppargc1bprovided by ZNC
Official Full Name: peroxisome proliferator-activated receptor gamma, coactivator 1 betaprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030616-43
See related: Ensembl:ENSDARG00000101569 AllianceGenome:ZFIN:ZDB-GENE-030616-43
Gene type: protein coding
RefSeq status: MODEL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: PERC; perc1b; fb55c08; sb:cb520; wu:fb55c08; si:bz1d10.4
Summary: Predicted to enable nuclear receptor coactivator activity. Predicted to be involved in positive regulation of DNA-binding transcription factor activity and positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in several structures, including cardiovascular system; cranial ganglion; immature eye; male organism; and retina. Human ortholog(s) of this gene implicated in obesity. Orthologous to human PPARGC1B (PPARG coactivator 1 beta). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	14	NC_007125.7 (24935054..25001584)
105	previous assembly	GRCz10 (GCF_000002035.5)	14	NC_007125.6 (24637858..24703338)

Chromosome 14 - NC_007125.7 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Submit: New GeneRIF Correction

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info
enables nuclear receptor coactivator activity	IBA Inferred from Biological aspect of Ancestor more info
enables nucleic acid binding	IEA Inferred from Electronic Annotation more info
enables transcription coregulator activity	IEA Inferred from Electronic Annotation more info
enables transcription factor binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in positive regulation of DNA-binding transcription factor activity	IBA Inferred from Biological aspect of Ancestor more info
involved_in positive regulation of transcription by RNA polymerase II	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

Preferred Names: peroxisome proliferator-activated receptor gamma coactivator 1-beta

Names: peroxisome proliferative activated receptor, gamma, coactivator 1, beta

NEW Try the new Transcript table

The following sections contain reference sequences that belong to a specific genome build. Explain