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    klhdc4.L kelch domain containing 4 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 379203, updated on 18-Aug-2023

    Summary

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    Official Symbol
    klhdc4.L
    Official Full Name
    kelch domain containing 4 L homeolog
    Primary source
    Xenbase:XB-GENE-987968
    Locus tag
    XELAEV_18022695mg
    See related
    EnsemblRapid:ENSXLAG00005031083
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    klhdc4
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    Genomic context

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    See klhdc4.L in Genome Data Viewer
    Location:
    chromosome: 4L
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (59738531..59762318, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (54534481..54558268, complement)

    Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene protein spinster homolog 1-like Neighboring gene junctophilin 3 L homeolog Neighboring gene solute carrier family 7 member 5 L homeolog Neighboring gene carbonic anhydrase VB, mitochondrial L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. Kırlı K, et al. Elife, 2015 Dec 17. PMID 26673895, Free PMC Article
    2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Clone Names

    • MGC53395

    General protein information

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    Preferred Names
    kelch domain containing 4 L homeolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001086047.1 → NP_001079516.1  kelch domain containing 4 L homeolog

      See identical proteins and their annotated locations for NP_001079516.1

      Status: PROVISIONAL

      Source sequence(s)
      BC043978
      UniProtKB/TrEMBL
      A0A974HNZ7, Q7ZY46
      Related
      ENSXLAP00005093229.1, ENSXLAT00005094912.1
      Conserved Domains (4) summary
      sd00038
      Location:119 → 174
      Kelch; KELCH repeat [structural motif]
      pfam13415
      Location:131 → 184
      Kelch_3; Galactose oxidase, central domain
      pfam13418
      Location:63 → 117
      Kelch_4; Galactose oxidase, central domain
      pfam13854
      Location:174 → 216
      Kelch_5; Kelch motif

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      59738531..59762318 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041589130.1 → XP_041445064.1  kelch domain containing 4 L homeolog isoform X1

      UniProtKB/TrEMBL
      A0A8J1MTA1
      Conserved Domains (2) summary
      PLN02193
      Location:8 → 131
      PLN02193; nitrile-specifier protein
      sd00038
      Location:1 → 46
      Kelch; KELCH repeat [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

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