U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    EFCAB2 EF-hand calcium binding domain 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 611783, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    EFCAB2provided by VGNC
    Official Full Name
    EF-hand calcium binding domain 2provided by VGNC
    Primary source
    VGNC:VGNC:106598
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See EFCAB2 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 7 NC_051811.1 (35746266..35868224)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 7 NC_006589.4 (35390801..35512461)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 7 NC_049228.1 (35862310..35984137)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 7 NC_049267.1 (35581759..35703560)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 7 NC_049748.1 (35596750..35718646)

    Chromosome 7 - NC_051811.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119872544 Neighboring gene heterogeneous nuclear ribonucleoprotein U Neighboring gene microRNA mir-7180 Neighboring gene kinesin family member 26B Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene uncharacterized LOC111096707

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    EF-hand calcium-binding domain-containing protein 2; dynein regulatory complex protein 8

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051811.1 Reference ROS_Cfam_1.0

      Range
      35746266..35868224
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038671603.1 → XP_038527531.1  dynein regulatory complex protein 8 isoform X1

      UniProtKB/TrEMBL
      A0A8C0JNE1
      Conserved Domains (1) summary
      PTZ00184
      Location:10 → 178
      PTZ00184; calmodulin; Provisional

    2. XM_038671607.1 → XP_038527535.1  dynein regulatory complex protein 8 isoform X5

      Conserved Domains (1) summary
      PTZ00184
      Location:10 → 137
      PTZ00184; calmodulin; Provisional

    3. XM_038671608.1 → XP_038527536.1  dynein regulatory complex protein 8 isoform X6

      UniProtKB/TrEMBL
      A0A8C0JNE1
      Conserved Domains (1) summary
      COG5126
      Location:44 → 136
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    4. XM_038671605.1 → XP_038527533.1  dynein regulatory complex protein 8 isoform X3

      UniProtKB/TrEMBL
      A0A8C0JNE1
      Conserved Domains (1) summary
      PTZ00184
      Location:10 → 160
      PTZ00184; calmodulin; Provisional

    5. XM_038671604.1 → XP_038527532.1  dynein regulatory complex protein 8 isoform X2

      UniProtKB/TrEMBL
      A0A8C0NL85
      Conserved Domains (1) summary
      PTZ00184
      Location:1 → 174
      PTZ00184; calmodulin; Provisional

    6. XM_038671606.1 → XP_038527534.1  dynein regulatory complex protein 8 isoform X4

      UniProtKB/TrEMBL
      A0A8C0NL85
      Conserved Domains (1) summary
      PTZ00184
      Location:1 → 156
      PTZ00184; calmodulin; Provisional

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049267.1 Alternate UMICH_Zoey_3.1

      Range
      35581759..35703560
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038481412.1 → XP_038337340.1  dynein regulatory complex protein 8 isoform X5

      Conserved Domains (1) summary
      PTZ00184
      Location:10 → 137
      PTZ00184; calmodulin; Provisional

    2. XM_038481408.1 → XP_038337336.1  dynein regulatory complex protein 8 isoform X1

      Conserved Domains (1) summary
      PTZ00184
      Location:10 → 178
      PTZ00184; calmodulin; Provisional

    3. XM_038481413.1 → XP_038337341.1  dynein regulatory complex protein 8 isoform X6

      Conserved Domains (1) summary
      COG5126
      Location:44 → 136
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    4. XM_038481410.1 → XP_038337338.1  dynein regulatory complex protein 8 isoform X3

      Conserved Domains (1) summary
      PTZ00184
      Location:10 → 160
      PTZ00184; calmodulin; Provisional

    5. XM_038481409.1 → XP_038337337.1  dynein regulatory complex protein 8 isoform X2

      Conserved Domains (1) summary
      PTZ00184
      Location:1 → 174
      PTZ00184; calmodulin; Provisional

    6. XM_038481411.1 → XP_038337339.1  dynein regulatory complex protein 8 isoform X4

      Conserved Domains (1) summary
      PTZ00184
      Location:1 → 156
      PTZ00184; calmodulin; Provisional

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049748.1 Alternate UNSW_CanFamBas_1.0

      Range
      35596750..35718646
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038606914.1 → XP_038462842.1  dynein regulatory complex protein 8 isoform X5

      Conserved Domains (1) summary
      PTZ00184
      Location:10 → 137
      PTZ00184; calmodulin; Provisional

    2. XM_038606910.1 → XP_038462838.1  dynein regulatory complex protein 8 isoform X1

      Conserved Domains (1) summary
      PTZ00184
      Location:10 → 178
      PTZ00184; calmodulin; Provisional

    3. XM_038606915.1 → XP_038462843.1  dynein regulatory complex protein 8 isoform X6

      Conserved Domains (1) summary
      COG5126
      Location:44 → 136
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    4. XM_038606912.1 → XP_038462840.1  dynein regulatory complex protein 8 isoform X3

      Conserved Domains (1) summary
      PTZ00184
      Location:10 → 160
      PTZ00184; calmodulin; Provisional

    5. XM_038606911.1 → XP_038462839.1  dynein regulatory complex protein 8 isoform X2

      Conserved Domains (1) summary
      PTZ00184
      Location:1 → 174
      PTZ00184; calmodulin; Provisional

    6. XM_038606913.1 → XP_038462841.1  dynein regulatory complex protein 8 isoform X4

      Conserved Domains (1) summary
      PTZ00184
      Location:1 → 156
      PTZ00184; calmodulin; Provisional

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049228.1 Alternate UU_Cfam_GSD_1.0

      Range
      35862310..35984137
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038542768.1 → XP_038398696.1  dynein regulatory complex protein 8 isoform X5

      Conserved Domains (1) summary
      PTZ00184
      Location:10 → 137
      PTZ00184; calmodulin; Provisional

    2. XM_038542764.1 → XP_038398692.1  dynein regulatory complex protein 8 isoform X1

      UniProtKB/TrEMBL
      A0A8C0JNE1
      Conserved Domains (1) summary
      PTZ00184
      Location:10 → 178
      PTZ00184; calmodulin; Provisional

    3. XM_038542769.1 → XP_038398697.1  dynein regulatory complex protein 8 isoform X6

      UniProtKB/TrEMBL
      A0A8C0JNE1
      Conserved Domains (1) summary
      COG5126
      Location:44 → 136
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    4. XM_038542766.1 → XP_038398694.1  dynein regulatory complex protein 8 isoform X3

      UniProtKB/TrEMBL
      A0A8C0JNE1
      Conserved Domains (1) summary
      PTZ00184
      Location:10 → 160
      PTZ00184; calmodulin; Provisional

    5. XM_038542765.1 → XP_038398693.1  dynein regulatory complex protein 8 isoform X2

      UniProtKB/TrEMBL
      A0A8C0NL85
      Conserved Domains (1) summary
      PTZ00184
      Location:1 → 174
      PTZ00184; calmodulin; Provisional

    6. XM_038542767.1 → XP_038398695.1  dynein regulatory complex protein 8 isoform X4

      UniProtKB/TrEMBL
      A0A8C0NL85
      Conserved Domains (1) summary
      PTZ00184
      Location:1 → 156
      PTZ00184; calmodulin; Provisional

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006589.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      35390801..35512461
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038568783.1 → XP_038424711.1  dynein regulatory complex protein 8 isoform X1

      UniProtKB/TrEMBL
      A0A8C0JNE1
      Conserved Domains (1) summary
      PTZ00184
      Location:10 → 178
      PTZ00184; calmodulin; Provisional

    2. XM_038568820.1 → XP_038424748.1  dynein regulatory complex protein 8 isoform X5

      Conserved Domains (1) summary
      PTZ00184
      Location:10 → 137
      PTZ00184; calmodulin; Provisional

    3. XM_038568829.1 → XP_038424757.1  dynein regulatory complex protein 8 isoform X6

      UniProtKB/TrEMBL
      A0A8C0JNE1
      Conserved Domains (1) summary
      COG5126
      Location:44 → 136
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    4. XM_038568801.1 → XP_038424729.1  dynein regulatory complex protein 8 isoform X3

      UniProtKB/TrEMBL
      A0A8C0JNE1
      Conserved Domains (1) summary
      PTZ00184
      Location:10 → 160
      PTZ00184; calmodulin; Provisional

    5. XM_038568792.1 → XP_038424720.1  dynein regulatory complex protein 8 isoform X2

      UniProtKB/TrEMBL
      A0A8C0NL85
      Conserved Domains (1) summary
      PTZ00184
      Location:1 → 174
      PTZ00184; calmodulin; Provisional

    6. XM_022421159.2 → XP_022276867.1  dynein regulatory complex protein 8 isoform X4

      UniProtKB/TrEMBL
      A0A8C0NL85
      Conserved Domains (1) summary
      PTZ00184
      Location:1 → 156
      PTZ00184; calmodulin; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials