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    RBM34 RNA binding motif protein 34 [ Canis lupus familiaris (dog) ]

    Gene ID: 479199, updated on 5-Mar-2024

    Summary

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    Official Symbol
    RBM34provided by VGNC
    Official Full Name
    RNA binding motif protein 34provided by VGNC
    Primary source
    VGNC:VGNC:45419
    See related
    Ensembl:ENSCAFG00845003503
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 4 NC_051808.1 (4777806..4803174)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 4 NC_006586.4 (4738127..4763520)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 4 NC_049225.1 (5127935..5153322)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 4 NC_049264.1 (4788616..4814002)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 4 NC_049745.1 (4906229..4931599)

    Chromosome 4 - NC_051808.1Genomic Context describing neighboring genes Neighboring gene geranylgeranyl diphosphate synthase 1 Neighboring gene AT-rich interaction domain 4B Neighboring gene small nucleolar RNA SNORA14 Neighboring gene translocase of outer mitochondrial membrane 20 Neighboring gene uncharacterized LOC119871434

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA-binding protein 34

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051808.1 Reference ROS_Cfam_1.0

      Range
      4777806..4803174
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038662495.1 → XP_038518423.1  RNA-binding protein 34 isoform X1

      UniProtKB/TrEMBL
      A0A8C0MDS3, A0A8C0PT14, A0A8I3MRC4
      Related
      ENSCAFP00845004966.1, ENSCAFT00845006255.1
      Conserved Domains (2) summary
      cd12394
      Location:182 → 273
      RRM1_RBM34; RNA recognition motif 1 (RRM1) found in RNA-binding protein 34 (RBM34) and similar proteins
      cd12395
      Location:285 → 357
      RRM2_RBM34; RNA recognition motif 2 (RRM2) found in RNA-binding protein 34 (RBM34) and similar proteins

    2. XM_038662496.1 → XP_038518424.1  RNA-binding protein 34 isoform X2

      UniProtKB/TrEMBL
      A0A8C0MH79, A0A8C0PT14
      Conserved Domains (2) summary
      cd12394
      Location:182 → 253
      RRM1_RBM34; RNA recognition motif 1 (RRM1) found in RNA-binding protein 34 (RBM34) and similar proteins
      cd12395
      Location:265 → 337
      RRM2_RBM34; RNA recognition motif 2 (RRM2) found in RNA-binding protein 34 (RBM34) and similar proteins

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049264.1 Alternate UMICH_Zoey_3.1

      Range
      4788616..4814002
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038472858.1 → XP_038328786.1  RNA-binding protein 34 isoform X1

      Conserved Domains (2) summary
      cd12394
      Location:182 → 273
      RRM1_RBM34; RNA recognition motif 1 (RRM1) found in RNA-binding protein 34 (RBM34) and similar proteins
      cd12395
      Location:285 → 357
      RRM2_RBM34; RNA recognition motif 2 (RRM2) found in RNA-binding protein 34 (RBM34) and similar proteins

    2. XM_038472859.1 → XP_038328787.1  RNA-binding protein 34 isoform X2

      Conserved Domains (2) summary
      cd12394
      Location:182 → 253
      RRM1_RBM34; RNA recognition motif 1 (RRM1) found in RNA-binding protein 34 (RBM34) and similar proteins
      cd12395
      Location:265 → 337
      RRM2_RBM34; RNA recognition motif 2 (RRM2) found in RNA-binding protein 34 (RBM34) and similar proteins

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049745.1 Alternate UNSW_CanFamBas_1.0

      Range
      4906229..4931599
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038598192.1 → XP_038454120.1  RNA-binding protein 34 isoform X1

      Conserved Domains (2) summary
      cd12394
      Location:182 → 273
      RRM1_RBM34; RNA recognition motif 1 (RRM1) found in RNA-binding protein 34 (RBM34) and similar proteins
      cd12395
      Location:285 → 357
      RRM2_RBM34; RNA recognition motif 2 (RRM2) found in RNA-binding protein 34 (RBM34) and similar proteins

    2. XM_038598193.1 → XP_038454121.1  RNA-binding protein 34 isoform X2

      Conserved Domains (2) summary
      cd12394
      Location:182 → 253
      RRM1_RBM34; RNA recognition motif 1 (RRM1) found in RNA-binding protein 34 (RBM34) and similar proteins
      cd12395
      Location:265 → 337
      RRM2_RBM34; RNA recognition motif 2 (RRM2) found in RNA-binding protein 34 (RBM34) and similar proteins

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049225.1 Alternate UU_Cfam_GSD_1.0

      Range
      5127935..5153322
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038533871.1 → XP_038389799.1  RNA-binding protein 34 isoform X1

      UniProtKB/TrEMBL
      A0A8C0MDS3, A0A8C0PT14, A0A8I3MRC4
      Conserved Domains (2) summary
      cd12394
      Location:182 → 273
      RRM1_RBM34; RNA recognition motif 1 (RRM1) found in RNA-binding protein 34 (RBM34) and similar proteins
      cd12395
      Location:285 → 357
      RRM2_RBM34; RNA recognition motif 2 (RRM2) found in RNA-binding protein 34 (RBM34) and similar proteins

    2. XM_038533872.1 → XP_038389800.1  RNA-binding protein 34 isoform X2

      UniProtKB/TrEMBL
      A0A8C0MH79, A0A8C0PT14
      Conserved Domains (2) summary
      cd12394
      Location:182 → 253
      RRM1_RBM34; RNA recognition motif 1 (RRM1) found in RNA-binding protein 34 (RBM34) and similar proteins
      cd12395
      Location:265 → 337
      RRM2_RBM34; RNA recognition motif 2 (RRM2) found in RNA-binding protein 34 (RBM34) and similar proteins

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006586.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      4738127..4763520
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005618810.3 → XP_005618867.1  RNA-binding protein 34 isoform X1

      UniProtKB/TrEMBL
      A0A8C0MDS3, A0A8C0PT14, A0A8I3MRC4
      Conserved Domains (2) summary
      cd12394
      Location:182 → 273
      RRM1_RBM34; RNA recognition motif 1 (RRM1) found in RNA-binding protein 34 (RBM34) and similar proteins
      cd12395
      Location:285 → 357
      RRM2_RBM34; RNA recognition motif 2 (RRM2) found in RNA-binding protein 34 (RBM34) and similar proteins

    2. XM_022417405.2 → XP_022273113.1  RNA-binding protein 34 isoform X2

      UniProtKB/TrEMBL
      A0A8C0MH79, A0A8C0PT14
      Conserved Domains (2) summary
      cd12394
      Location:182 → 253
      RRM1_RBM34; RNA recognition motif 1 (RRM1) found in RNA-binding protein 34 (RBM34) and similar proteins
      cd12395
      Location:265 → 337
      RRM2_RBM34; RNA recognition motif 2 (RRM2) found in RNA-binding protein 34 (RBM34) and similar proteins
    Nucleotide Protein
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