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    HBS1L HBS1 like translational GTPase [ Canis lupus familiaris (dog) ]

    Gene ID: 476211, updated on 5-Mar-2024

    Summary

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    Official Symbol
    HBS1Lprovided by VGNC
    Official Full Name
    HBS1 like translational GTPaseprovided by VGNC
    Primary source
    VGNC:VGNC:41612
    See related
    Ensembl:ENSCAFG00845005059
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See HBS1L in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (27861829..27948018, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (28584758..28671733, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (27937668..28024033, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (27746364..27833359, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (27626482..27713519, complement)

    Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119870651 Neighboring gene aldehyde dehydrogenase 8 family member A1 Neighboring gene SNRPN upstream reading frame protein-like Neighboring gene uncharacterized LOC111095371 Neighboring gene MYB proto-oncogene, transcription factor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    HBS1-like protein
    Names
    HBS1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051805.1 Reference ROS_Cfam_1.0

      Range
      27861829..27948018 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038654187.1 → XP_038510115.1  HBS1-like protein isoform X2

      UniProtKB/TrEMBL
      A0A8C0MEF8
      Conserved Domains (2) summary
      COG5256
      Location:253 → 681
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]
      pfam08938
      Location:55 → 127
      HBS1_N; HBS1 N-terminus

    2. XM_038654186.1 → XP_038510114.1  HBS1-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8C0MEF8, A0A8I3MW83
      Related
      ENSCAFP00845007173.1, ENSCAFT00845009100.1
      Conserved Domains (2) summary
      COG5256
      Location:257 → 685
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]
      pfam08938
      Location:55 → 127
      HBS1_N; HBS1 N-terminus

    3. XM_038654189.1 → XP_038510117.1  HBS1-like protein isoform X4

      UniProtKB/TrEMBL
      A0A8I3MW74
      Related
      ENSCAFP00845007161.1, ENSCAFT00845009081.1
      Conserved Domains (1) summary
      COG5256
      Location:149 → 577
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]

    4. XM_038654190.1 → XP_038510118.1  HBS1-like protein isoform X5

      UniProtKB/TrEMBL
      A0A8I3MW74
      Conserved Domains (1) summary
      COG5256
      Location:92 → 520
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]

    5. XM_038654188.1 → XP_038510116.1  HBS1-like protein isoform X3

      UniProtKB/TrEMBL
      A0A8C0MAR0, A0A8I3MZC3
      Related
      ENSCAFP00845007207.1, ENSCAFT00845009151.1
      Conserved Domains (1) summary
      pfam08938
      Location:55 → 127
      HBS1_N; HBS1 N-terminus

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049261.1 Alternate UMICH_Zoey_3.1

      Range
      27746364..27833359 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038465451.1 → XP_038321379.1  HBS1-like protein isoform X2

      Conserved Domains (2) summary
      COG5256
      Location:253 → 681
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]
      pfam08938
      Location:55 → 127
      HBS1_N; HBS1 N-terminus

    2. XM_038465450.1 → XP_038321378.1  HBS1-like protein isoform X1

    3. XM_038465453.1 → XP_038321381.1  HBS1-like protein isoform X4

    4. XM_038465454.1 → XP_038321382.1  HBS1-like protein isoform X5

      Conserved Domains (1) summary
      COG5256
      Location:92 → 520
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]

    5. XM_038465452.1 → XP_038321380.1  HBS1-like protein isoform X3

      Conserved Domains (1) summary
      pfam08938
      Location:55 → 127
      HBS1_N; HBS1 N-terminus

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

      Range
      27626482..27713519 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038590363.1 → XP_038446291.1  HBS1-like protein isoform X2

      Conserved Domains (2) summary
      COG5256
      Location:253 → 681
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]
      pfam08938
      Location:55 → 127
      HBS1_N; HBS1 N-terminus

    2. XM_038590362.1 → XP_038446290.1  HBS1-like protein isoform X1

    3. XM_038590365.1 → XP_038446293.1  HBS1-like protein isoform X4

    4. XM_038590366.1 → XP_038446294.1  HBS1-like protein isoform X5

      Conserved Domains (1) summary
      COG5256
      Location:92 → 520
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]

    5. XM_038590364.1 → XP_038446292.1  HBS1-like protein isoform X3

      Conserved Domains (1) summary
      pfam08938
      Location:55 → 127
      HBS1_N; HBS1 N-terminus

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

      Range
      27937668..28024033 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038526068.1 → XP_038381996.1  HBS1-like protein isoform X2

      UniProtKB/TrEMBL
      A0A8C0MEF8
      Conserved Domains (2) summary
      COG5256
      Location:253 → 681
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]
      pfam08938
      Location:55 → 127
      HBS1_N; HBS1 N-terminus

    2. XM_038526067.1 → XP_038381995.1  HBS1-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8C0LF72, A0A8C0MBD6, A0A8C0MEF8, A0A8P0P297

    3. XM_038526069.1 → XP_038381997.1  HBS1-like protein isoform X4

      UniProtKB/TrEMBL
      A0A8C0MAG2, A0A8P0T9R2

    4. XM_038526070.1 → XP_038381998.1  HBS1-like protein isoform X5

      UniProtKB/TrEMBL
      A0A8P0T9R2
      Conserved Domains (1) summary
      COG5256
      Location:92 → 520
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      28584758..28671733 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038493839.1 → XP_038349767.1  HBS1-like protein isoform X2

      UniProtKB/TrEMBL
      A0A8C0MEF8
      Conserved Domains (2) summary
      COG5256
      Location:253 → 681
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]
      pfam08938
      Location:55 → 127
      HBS1_N; HBS1 N-terminus

    2. XM_533416.6 → XP_533416.2  HBS1-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8C0LF72, A0A8C0MBD6, A0A8C0MEF8, A0A8P0P297
      Conserved Domains (2) summary
      COG5256
      Location:257 → 685
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]
      pfam08938
      Location:55 → 128
      HBS1_N; HBS1 N-terminus

    3. XM_005615431.4 → XP_005615488.1  HBS1-like protein isoform X4

      UniProtKB/TrEMBL
      A0A8C0MAG2, A0A8P0T9R2
      Conserved Domains (1) summary
      COG5256
      Location:149 → 577
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]

    4. XM_038494046.1 → XP_038349974.1  HBS1-like protein isoform X5

      UniProtKB/TrEMBL
      A0A8P0T9R2
      Conserved Domains (1) summary
      COG5256
      Location:92 → 520
      TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]

    5. XM_014111981.3 → XP_013967456.1  HBS1-like protein isoform X3

      UniProtKB/TrEMBL
      A0A8C0MAR0, A0A8I3MZC3
      Conserved Domains (1) summary
      pfam08938
      Location:55 → 127
      HBS1_N; HBS1 N-terminus
    Nucleotide Protein
    Heading Accession and Version

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