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    HIGD2A HIG1 hypoxia inducible domain family member 2A [ Canis lupus familiaris (dog) ]

    Gene ID: 479281, updated on 5-Mar-2024

    Summary

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    Gene symbol
    HIGD2A
    Gene description
    HIG1 hypoxia inducible domain family member 2A
    See related
    Ensembl:ENSCAFG00845012471
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See HIGD2A in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 4 NC_051808.1 (37305086..37306087, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 4 NC_006586.4 (36904973..36905973, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 4 NC_049225.1 (37826978..37827978, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 4 NC_049264.1 (37130372..37131372, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 4 NC_049745.1 (37317956..37318957, complement)

    Chromosome 4 - NC_051808.1Genomic Context describing neighboring genes Neighboring gene Fas associated factor family member 2 Neighboring gene uncharacterized LOC111095533 Neighboring gene uncharacterized LOC111095534 Neighboring gene clathrin light chain B Neighboring gene NOP16 nucleolar protein Neighboring gene ADP ribosylation factor like GTPase 10 Neighboring gene microRNA mir-1271

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mitochondrial respirasome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    HIG1 domain family member 2A, mitochondrial
    Names
    HIG1 domain family, member 2A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051808.1 Reference ROS_Cfam_1.0

      Range
      37305086..37306087 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038663317.1 → XP_038519245.1  HIG1 domain family member 2A, mitochondrial

      UniProtKB/TrEMBL
      A0A8C0KB12, A0A8C0KBW3, A0A8C0LZ78, A0A8C0PTQ0, A0A8I3NJ75, A0A8I3NPH6
      Related
      ENSCAFP00845017450.1, ENSCAFT00845022193.1
      Conserved Domains (1) summary
      pfam04588
      Location:47 → 96
      HIG_1_N; Hypoxia induced protein conserved region

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049264.1 Alternate UMICH_Zoey_3.1

      Range
      37130372..37131372 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038473635.1 → XP_038329563.1  HIG1 domain family member 2A, mitochondrial

      Conserved Domains (1) summary
      pfam04588
      Location:47 → 96
      HIG_1_N; Hypoxia induced protein conserved region

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049745.1 Alternate UNSW_CanFamBas_1.0

      Range
      37317956..37318957 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038599013.1 → XP_038454941.1  HIG1 domain family member 2A, mitochondrial

      Conserved Domains (1) summary
      pfam04588
      Location:47 → 96
      HIG_1_N; Hypoxia induced protein conserved region

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049225.1 Alternate UU_Cfam_GSD_1.0

      Range
      37826978..37827978 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038534708.1 → XP_038390636.1  HIG1 domain family member 2A, mitochondrial

      UniProtKB/TrEMBL
      A0A8C0KB12, A0A8C0PTQ0, A0A8I3NJ75, A0A8P0TTD0

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006586.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      36904973..36905973 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_536423.6 → XP_536423.1  HIG1 domain family member 2A, mitochondrial

      UniProtKB/TrEMBL
      A0A8C0KB12, A0A8C0PTQ0, A0A8I3NJ75, A0A8P0TTD0
      Conserved Domains (1) summary
      pfam04588
      Location:47 → 94
      HIG_1_N; Hypoxia induced protein conserved region
    Nucleotide Protein
    Heading Accession and Version

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