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    SH3TC2 SH3 domain and tetratricopeptide repeats 2 [ Gallus gallus (chicken) ]

    Gene ID: 426627, updated on 5-Mar-2024

    Summary

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    Symbol
    SH3TC2provided by CGNC
    Full Name
    SH3 domain and tetratricopeptide repeats 2provided by CGNC
    Primary source
    CGNC:66507
    See related
    Ensembl:ENSGALG00010012312
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See SH3TC2 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 13 NC_052544.1 (8204228..8235901)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 13 NC_052585.1 (8209485..8241073)

    Chromosome 13 - NC_052544.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121106735 Neighboring gene actin filament associated protein 1 like 1 Neighboring gene actin binding LIM protein family member 3 Neighboring gene adrenoceptor beta 2 Neighboring gene uncharacterized LOC112533432

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of ERBB signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in recycling endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SH3 domain and tetratricopeptide repeats-containing protein 2; SH3 domain and tetratricopeptide repeat-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052544.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      8204228..8235901
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040647139.2 → XP_040503073.1  SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YM04
      Conserved Domains (4) summary
      COG0457
      Location:1120 → 1297
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:1205 → 1232
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:1217 → 1274
      TPR_12; Tetratricopeptide repeat
      cl17036
      Location:346 → 400
      SH3; Src Homology 3 domain superfamily

    2. XM_025154907.3 → XP_025010675.2  SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YM04
      Related
      ENSGALP00010017132.1, ENSGALT00010029475.1
      Conserved Domains (4) summary
      COG0457
      Location:1120 → 1297
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:1205 → 1232
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:1217 → 1274
      TPR_12; Tetratricopeptide repeat
      cl17036
      Location:346 → 400
      SH3; Src Homology 3 domain superfamily

    3. XM_040647137.2 → XP_040503071.1  SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YM04
      Conserved Domains (4) summary
      COG0457
      Location:1120 → 1297
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:1205 → 1232
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:1217 → 1274
      TPR_12; Tetratricopeptide repeat
      cl17036
      Location:346 → 400
      SH3; Src Homology 3 domain superfamily

    4. XM_040647141.2 → XP_040503075.1  SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X2

      Conserved Domains (1) summary
      cl17036
      Location:346 → 400
      SH3; Src Homology 3 domain superfamily

    5. XM_040647142.2 → XP_040503076.1  SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X3

      Conserved Domains (3) summary
      sd00006
      Location:1118 → 1145
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:1130 → 1187
      TPR_12; Tetratricopeptide repeat
      cl17036
      Location:259 → 313
      SH3; Src Homology 3 domain superfamily

    6. XM_040647143.2 → XP_040503077.1  SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X3

      Conserved Domains (3) summary
      sd00006
      Location:1118 → 1145
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:1130 → 1187
      TPR_12; Tetratricopeptide repeat
      cl17036
      Location:259 → 313
      SH3; Src Homology 3 domain superfamily

    7. XM_040647140.2 → XP_040503074.1  SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YM04
      Conserved Domains (4) summary
      COG0457
      Location:1120 → 1297
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:1205 → 1232
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:1217 → 1274
      TPR_12; Tetratricopeptide repeat
      cl17036
      Location:346 → 400
      SH3; Src Homology 3 domain superfamily

    8. XM_040647144.2 → XP_040503078.1  SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X4

      Conserved Domains (1) summary
      cl17036
      Location:346 → 400
      SH3; Src Homology 3 domain superfamily

    9. XM_040647145.2 → XP_040503079.1  SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X5

      Conserved Domains (2) summary
      pfam13424
      Location:915 → 984
      TPR_12; Tetratricopeptide repeat
      cl17036
      Location:346 → 400
      SH3; Src Homology 3 domain superfamily

    RNA

    1. XR_005839611.2 RNA Sequence

    2. XR_005839610.2 RNA Sequence

    3. XR_005839612.2 RNA Sequence

    4. XR_005839609.2 RNA Sequence

    5. XR_005839613.2 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052585.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      8209485..8241073
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040683017.2 → XP_040538951.1  SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1

      Conserved Domains (4) summary
      COG0457
      Location:1120 → 1297
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:1205 → 1232
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:1217 → 1274
      TPR_12; Tetratricopeptide repeat
      cl17036
      Location:346 → 400
      SH3; Src Homology 3 domain superfamily

    2. XM_046927173.1 → XP_046783129.1  SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1

    3. XM_040683019.2 → XP_040538953.1  SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X2

      Conserved Domains (1) summary
      cl17036
      Location:346 → 400
      SH3; Src Homology 3 domain superfamily

    4. XM_040683020.2 → XP_040538954.1  SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X3

      Conserved Domains (3) summary
      sd00006
      Location:1118 → 1145
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:1130 → 1187
      TPR_12; Tetratricopeptide repeat
      cl17036
      Location:259 → 313
      SH3; Src Homology 3 domain superfamily

    5. XM_040683021.2 → XP_040538955.1  SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X3

      Conserved Domains (3) summary
      sd00006
      Location:1118 → 1145
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:1130 → 1187
      TPR_12; Tetratricopeptide repeat
      cl17036
      Location:259 → 313
      SH3; Src Homology 3 domain superfamily

    6. XM_040683018.2 → XP_040538952.1  SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1

      Conserved Domains (4) summary
      COG0457
      Location:1120 → 1297
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:1205 → 1232
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:1217 → 1274
      TPR_12; Tetratricopeptide repeat
      cl17036
      Location:346 → 400
      SH3; Src Homology 3 domain superfamily

    7. XM_040683016.2 → XP_040538950.1  SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1

      Conserved Domains (4) summary
      COG0457
      Location:1120 → 1297
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:1205 → 1232
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:1217 → 1274
      TPR_12; Tetratricopeptide repeat
      cl17036
      Location:346 → 400
      SH3; Src Homology 3 domain superfamily

    8. XM_040683022.2 → XP_040538956.1  SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X4

      Conserved Domains (1) summary
      cl17036
      Location:346 → 400
      SH3; Src Homology 3 domain superfamily

    9. XM_040683023.2 → XP_040538957.1  SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X5

      Conserved Domains (3) summary
      sd00006
      Location:916 → 942
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:915 → 984
      TPR_12; Tetratricopeptide repeat
      cl17036
      Location:346 → 400
      SH3; Src Homology 3 domain superfamily

    RNA

    1. XR_005854000.2 RNA Sequence

    2. XR_005853999.2 RNA Sequence

    3. XR_005854001.2 RNA Sequence

    4. XR_005853998.2 RNA Sequence

    5. XR_005854002.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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