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    GALNT16 polypeptide N-acetylgalactosaminyltransferase 16 [ Gallus gallus (chicken) ]

    Gene ID: 423263, updated on 5-Mar-2024

    Summary

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    Symbol
    GALNT16provided by CGNC
    Full Name
    polypeptide N-acetylgalactosaminyltransferase 16provided by CGNC
    Primary source
    CGNC:7187
    See related
    Ensembl:ENSGALG00010020287
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    GALNTL1
    Orthologs
    human mouse all
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    Genomic context

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    See GALNT16 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (27554048..27614488, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (27514214..27574641, complement)

    Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology and coiled-coil domain containing D1 Neighboring gene solute carrier family 39 member 9 Neighboring gene enhancer of rudimentary homolog (Drosophila) Neighboring gene uncharacterized LOC121113291 Neighboring gene exonuclease 3'-5' domain containing 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polypeptide N-acetylgalactosaminyltransferase 16
    Names
    UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16
    UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1
    XP_001231965.3
    XP_015143081.1
    XP_040527997.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      27554048..27614488 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015287595.4 → XP_015143081.1  polypeptide N-acetylgalactosaminyltransferase 16 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZCJ2
      Conserved Domains (3) summary
      cd02510
      Location:134 → 428
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      COG0463
      Location:134 → 394
      WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
      cd00161
      Location:447 → 523
      RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

    2. XM_001231964.7 → XP_001231965.3  polypeptide N-acetylgalactosaminyltransferase 16 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z6S1, A0A8V0ZCJ2
      Related
      ENSGALP00010028933.1, ENSGALT00010048950.1
      Conserved Domains (2) summary
      cd02510
      Location:134 → 428
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      cd00161
      Location:447 → 559
      RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      27514214..27574641 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040672063.2 → XP_040527997.1  polypeptide N-acetylgalactosaminyltransferase 16 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Z6S1, A0A8V0ZCJ2
      Conserved Domains (2) summary
      cd02510
      Location:134 → 428
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      cd00161
      Location:447 → 559
      RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    Nucleotide Protein
    Heading Accession and Version

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