U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    MTMR3 myotubularin related protein 3 [ Bos taurus (cattle) ]

    Gene ID: 535099, updated on 6-Jun-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    MTMR3provided by VGNC
    Official Full Name
    myotubularin related protein 3provided by VGNC
    Primary source
    VGNC:VGNC:31742
    See related
    BGD:BT14046; Ensembl:ENSBTAG00000001030
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MTMR3 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 17 NC_037344.1 (68971311..69102738)

    Chromosome 17 - NC_037344.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101904268 Neighboring gene activating signal cointegrator 1 complex subunit 2 Neighboring gene proline-rich protein 2-like Neighboring gene U6 spliceosomal RNA Neighboring gene transfer RNA cysteine (anticodon ACA) Neighboring gene HORMA domain containing 2 Neighboring gene LIF interleukin 6 family cytokine

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037344.1 Chromosome 17 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Clone Names

    • MGC143436

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol-3-phosphate phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein phosphatase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of autophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    myotubularin-related protein 3
    NP_001075074.1
    XP_005218137.1
    XP_005218138.1
    XP_005218139.1
    XP_005218140.1
    XP_005218141.1
    XP_005218142.1
    XP_005218143.1
    XP_005218144.1
    XP_005218145.1
    XP_005218148.1
    XP_010812406.1
    XP_010812407.1
    XP_015331045.1
    XP_024833128.1
    XP_059732081.1
    XP_059732083.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001081605.1 → NP_001075074.1  myotubularin-related protein 3

      See identical proteins and their annotated locations for NP_001075074.1

      Status: PROVISIONAL

      Source sequence(s)
      BC133296
      UniProtKB/TrEMBL
      A2VDL5, F1MFT9
      Related
      ENSBTAP00000048361.2, ENSBTAT00000057477.3
      Conserved Domains (2) summary
      cd13341
      Location:23 → 127
      PH-GRAM_MTMR3; Myotubularian (MTM) related 3 protein (MTMR3) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam06602
      Location:138 → 534
      Myotub-related; Myotubularin-like phosphatase domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037344.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      68971311..69102738
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059876098.1 → XP_059732081.1  myotubularin-related protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MA02

    2. XM_005218080.5 → XP_005218137.1  myotubularin-related protein 3 isoform X1

      See identical proteins and their annotated locations for XP_005218137.1

      UniProtKB/TrEMBL
      A0A3Q1MA02
      Conserved Domains (3) summary
      cd15732
      Location:1120 → 1189
      FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
      pfam06602
      Location:138 → 534
      Myotub-related; Myotubularin-like phosphatase domain
      cl17171
      Location:23 → 127
      PH-like; Pleckstrin homology-like domain

    3. XM_005218082.5 → XP_005218139.1  myotubularin-related protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1LRR1, A0A3Q1MA02
      Related
      ENSBTAP00000057750.1, ENSBTAT00000077486.2
      Conserved Domains (3) summary
      cd15732
      Location:1120 → 1180
      FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
      pfam06602
      Location:138 → 534
      Myotub-related; Myotubularin-like phosphatase domain
      cl17171
      Location:23 → 127
      PH-like; Pleckstrin homology-like domain

    4. XM_005218085.5 → XP_005218142.1  myotubularin-related protein 3 isoform X5

      UniProtKB/TrEMBL
      A0A3Q1MA02
      Conserved Domains (3) summary
      cd13341
      Location:23 → 127
      PH-GRAM_MTMR3; Myotubularian (MTM) related 3 protein (MTMR3) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd15732
      Location:1083 → 1152
      FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
      pfam06602
      Location:138 → 534
      Myotub-related; Myotubularin-like phosphatase domain

    5. XM_015475559.3 → XP_015331045.1  myotubularin-related protein 3 isoform X7

      UniProtKB/TrEMBL
      A0A3Q1MA02
      Conserved Domains (4) summary
      pfam09606
      Location:685 → 1135
      Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
      cd13341
      Location:23 → 127
      PH-GRAM_MTMR3; Myotubularian (MTM) related 3 protein (MTMR3) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd15732
      Location:1083 → 1143
      FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
      pfam06602
      Location:138 → 534
      Myotub-related; Myotubularin-like phosphatase domain

    6. XM_010814105.4 → XP_010812407.1  myotubularin-related protein 3 isoform X11

      UniProtKB/TrEMBL
      F1MFT9
      Conserved Domains (2) summary
      cd13341
      Location:23 → 127
      PH-GRAM_MTMR3; Myotubularian (MTM) related 3 protein (MTMR3) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam06602
      Location:138 → 534
      Myotub-related; Myotubularin-like phosphatase domain

    7. XM_005218086.5 → XP_005218143.1  myotubularin-related protein 3 isoform X6

      UniProtKB/TrEMBL
      A0A3Q1MA02
      Related
      ENSBTAP00000067037.2, ENSBTAT00000073252.2
      Conserved Domains (3) summary
      cd15732
      Location:1082 → 1151
      FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
      pfam06602
      Location:138 → 496
      Myotub-related; Myotubularin-like phosphatase domain
      cl17171
      Location:23 → 127
      PH-like; Pleckstrin homology-like domain

    8. XM_005218083.5 → XP_005218140.1  myotubularin-related protein 3 isoform X3

      UniProtKB/TrEMBL
      A0A3Q1MA02, A0A3Q1MNY6
      Related
      ENSBTAP00000073599.2, ENSBTAT00000072936.2
      Conserved Domains (3) summary
      cd13341
      Location:23 → 116
      PH-GRAM_MTMR3; Myotubularian (MTM) related 3 protein (MTMR3) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd15732
      Location:1109 → 1178
      FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
      pfam06602
      Location:127 → 523
      Myotub-related; Myotubularin-like phosphatase domain

    9. XM_005218084.5 → XP_005218141.1  myotubularin-related protein 3 isoform X4

      See identical proteins and their annotated locations for XP_005218141.1

      UniProtKB/TrEMBL
      A0A3Q1MA02
      Conserved Domains (4) summary
      cd13341
      Location:23 → 116
      PH-GRAM_MTMR3; Myotubularian (MTM) related 3 protein (MTMR3) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd15732
      Location:1109 → 1169
      FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
      pfam06602
      Location:160 → 524
      Myotub-related; Myotubularin-like phosphatase domain
      cl28033
      Location:729 → 1007
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

    10. XM_005218087.5 → XP_005218144.1  myotubularin-related protein 3 isoform X8

      UniProtKB/TrEMBL
      A0A3Q1MA02, A0A3Q1MFX5
      Related
      ENSBTAP00000069442.2, ENSBTAT00000082862.2
      Conserved Domains (3) summary
      cd13341
      Location:23 → 116
      PH-GRAM_MTMR3; Myotubularian (MTM) related 3 protein (MTMR3) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd15732
      Location:1072 → 1141
      FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
      pfam06602
      Location:127 → 523
      Myotub-related; Myotubularin-like phosphatase domain

    11. XM_005218088.5 → XP_005218145.1  myotubularin-related protein 3 isoform X9

      UniProtKB/TrEMBL
      A0A3Q1MA02
      Conserved Domains (4) summary
      pfam09606
      Location:674 → 1124
      Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
      cd13341
      Location:23 → 116
      PH-GRAM_MTMR3; Myotubularian (MTM) related 3 protein (MTMR3) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd15732
      Location:1072 → 1132
      FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
      pfam06602
      Location:127 → 523
      Myotub-related; Myotubularin-like phosphatase domain

    12. XM_005218081.5 → XP_005218138.1  myotubularin-related protein 3 isoform X1

      See identical proteins and their annotated locations for XP_005218138.1

      UniProtKB/TrEMBL
      A0A3Q1MA02
      Conserved Domains (3) summary
      cd15732
      Location:1120 → 1189
      FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
      pfam06602
      Location:138 → 534
      Myotub-related; Myotubularin-like phosphatase domain
      cl17171
      Location:23 → 127
      PH-like; Pleckstrin homology-like domain

    13. XM_024977360.2 → XP_024833128.1  myotubularin-related protein 3 isoform X4

      UniProtKB/TrEMBL
      A0A3Q1MA02
      Conserved Domains (4) summary
      cd13341
      Location:23 → 116
      PH-GRAM_MTMR3; Myotubularian (MTM) related 3 protein (MTMR3) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd15732
      Location:1109 → 1169
      FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
      pfam06602
      Location:160 → 524
      Myotub-related; Myotubularin-like phosphatase domain
      cl28033
      Location:729 → 1007
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

    14. XM_059876100.1 → XP_059732083.1  myotubularin-related protein 3 isoform X10

      UniProtKB/TrEMBL
      F1MFT9

    15. XM_010814104.4 → XP_010812406.1  myotubularin-related protein 3 isoform X1

      See identical proteins and their annotated locations for XP_010812406.1

      UniProtKB/TrEMBL
      A0A3Q1MA02
      Conserved Domains (3) summary
      cd15732
      Location:1120 → 1189
      FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
      pfam06602
      Location:138 → 534
      Myotub-related; Myotubularin-like phosphatase domain
      cl17171
      Location:23 → 127
      PH-like; Pleckstrin homology-like domain

    16. XM_005218091.5 → XP_005218148.1  myotubularin-related protein 3 isoform X12

      UniProtKB/TrEMBL
      A0A3Q1MA02
      Conserved Domains (3) summary
      cd15732
      Location:942 → 1011
      FYVE_MTMR3; FYVE domain found in myotubularin-related protein 3 (MTMR3) and similar proteins
      pfam06602
      Location:1 → 357
      Myotub-related; Myotubularin-like phosphatase domain
      cl28033
      Location:562 → 840
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Miscellaneous