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    CALU calumenin [ Canis lupus familiaris (dog) ]

    Gene ID: 475201, updated on 5-Mar-2024

    Summary

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    Official Symbol
    CALUprovided by VGNC
    Official Full Name
    calumeninprovided by VGNC
    Primary source
    VGNC:VGNC:54755
    See related
    Ensembl:ENSCAFG00845023757
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See CALU in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 14 NC_051818.1 (7635858..7665254, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 14 NC_006596.4 (7556743..7586116, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 14 NC_049235.1 (7728236..7757618, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 14 NC_049274.1 (7840807..7870176, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 14 NC_049755.1 (7582998..7612128, complement)

    Chromosome 14 - NC_051818.1Genomic Context describing neighboring genes Neighboring gene transfer RNA proline (anticodon AGG) Neighboring gene opsin 1, short wave sensitive Neighboring gene golgi associated RAB2 interactor 1B Neighboring gene golgi associated RAB2 interactor 1A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calumenin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051818.1 Reference ROS_Cfam_1.0

      Range
      7635858..7665254 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038686216.1 → XP_038542144.1  calumenin isoform X2

      UniProtKB/TrEMBL
      A0A8C0MKA1, A0A8I3S7P9, A0A8P0T631
      Related
      ENSCAFP00845032944.1, ENSCAFT00845042005.1
      Conserved Domains (1) summary
      cd16228
      Location:37 → 299
      EFh_CREC_Calumenin; EF-hand, calcium binding motif, found in calumenin

    2. XM_038686215.1 → XP_038542143.1  calumenin isoform X1

      UniProtKB/TrEMBL
      A0A8C0LAM4, A0A8C0MY31, A0A8C0RFE4, A0A8I3PU96
      Conserved Domains (1) summary
      cd16228
      Location:37 → 299
      EFh_CREC_Calumenin; EF-hand, calcium binding motif, found in calumenin

    3. XM_038686217.1 → XP_038542145.1  calumenin isoform X1

      UniProtKB/TrEMBL
      A0A8C0LAM4, A0A8C0MY31, A0A8C0RFE4, A0A8I3PU96
      Related
      ENSCAFP00845033092.1, ENSCAFT00845042193.1
      Conserved Domains (1) summary
      cd16228
      Location:37 → 299
      EFh_CREC_Calumenin; EF-hand, calcium binding motif, found in calumenin

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049274.1 Alternate UMICH_Zoey_3.1

      Range
      7840807..7870176 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038494301.1 → XP_038350229.1  calumenin isoform X2

      Conserved Domains (1) summary
      cd16228
      Location:37 → 299
      EFh_CREC_Calumenin; EF-hand, calcium binding motif, found in calumenin

    2. XM_038494300.1 → XP_038350228.1  calumenin isoform X1

      Conserved Domains (1) summary
      cd16228
      Location:37 → 299
      EFh_CREC_Calumenin; EF-hand, calcium binding motif, found in calumenin

    3. XM_038494302.1 → XP_038350230.1  calumenin isoform X1

      Conserved Domains (1) summary
      cd16228
      Location:37 → 299
      EFh_CREC_Calumenin; EF-hand, calcium binding motif, found in calumenin

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049755.1 Alternate UNSW_CanFamBas_1.0

      Range
      7582998..7612128 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038620527.1 → XP_038476455.1  calumenin isoform X2

      Conserved Domains (1) summary
      cd16228
      Location:37 → 299
      EFh_CREC_Calumenin; EF-hand, calcium binding motif, found in calumenin

    2. XM_038620526.1 → XP_038476454.1  calumenin isoform X1

      Conserved Domains (1) summary
      cd16228
      Location:37 → 299
      EFh_CREC_Calumenin; EF-hand, calcium binding motif, found in calumenin

    3. XM_038620528.1 → XP_038476456.1  calumenin isoform X1

      Conserved Domains (1) summary
      cd16228
      Location:37 → 299
      EFh_CREC_Calumenin; EF-hand, calcium binding motif, found in calumenin

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049235.1 Alternate UU_Cfam_GSD_1.0

      Range
      7728236..7757618 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038556598.1 → XP_038412526.1  calumenin isoform X2

      UniProtKB/TrEMBL
      A0A8C0MKA1, A0A8I3S7P9, A0A8P0T631
      Conserved Domains (1) summary
      cd16228
      Location:37 → 299
      EFh_CREC_Calumenin; EF-hand, calcium binding motif, found in calumenin

    2. XM_038556597.1 → XP_038412525.1  calumenin isoform X1

      UniProtKB/TrEMBL
      A0A8C0LAM4, A0A8C0MY31, A0A8C0RFE4, A0A8I3PU96
      Conserved Domains (1) summary
      cd16228
      Location:37 → 299
      EFh_CREC_Calumenin; EF-hand, calcium binding motif, found in calumenin

    3. XM_038556599.1 → XP_038412527.1  calumenin isoform X1

      UniProtKB/TrEMBL
      A0A8C0LAM4, A0A8C0MY31, A0A8C0RFE4, A0A8I3PU96
      Conserved Domains (1) summary
      cd16228
      Location:37 → 299
      EFh_CREC_Calumenin; EF-hand, calcium binding motif, found in calumenin

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006596.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      7556743..7586116 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_853685.6 → XP_858778.1  calumenin isoform X2

      See identical proteins and their annotated locations for XP_858778.1

      UniProtKB/TrEMBL
      A0A8C0MKA1, A0A8I3S7P9, A0A8P0T631
      Conserved Domains (1) summary
      cd16228
      Location:37 → 299
      EFh_CREC_Calumenin; EF-hand, calcium binding motif, found in calumenin

    2. XM_844242.6 → XP_849335.1  calumenin isoform X1

      See identical proteins and their annotated locations for XP_849335.1

      UniProtKB/TrEMBL
      A0A8C0LAM4, A0A8C0MY31, A0A8C0RFE4, A0A8I3PU96
      Conserved Domains (1) summary
      cd16228
      Location:37 → 299
      EFh_CREC_Calumenin; EF-hand, calcium binding motif, found in calumenin

    3. XM_038437802.1 → XP_038293730.1  calumenin isoform X1

      UniProtKB/TrEMBL
      A0A8C0LAM4, A0A8C0MY31, A0A8C0RFE4, A0A8I3PU96
      Conserved Domains (1) summary
      cd16228
      Location:37 → 299
      EFh_CREC_Calumenin; EF-hand, calcium binding motif, found in calumenin
    Nucleotide Protein
    Heading Accession and Version

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