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    SLC16A4 solute carrier family 16 member 4 [ Canis lupus familiaris (dog) ]

    Gene ID: 479908, updated on 5-Mar-2024

    Summary

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    Official Symbol
    SLC16A4provided by VGNC
    Official Full Name
    solute carrier family 16 member 4provided by VGNC
    Primary source
    VGNC:VGNC:46243
    See related
    Ensembl:ENSCAFG00845002060
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See SLC16A4 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (41937081..41965734)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (44382537..44411188)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (42063335..42092023)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (41657195..41685844)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (41628024..41656868)

    Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene prokineticin 1 Neighboring gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC111096344 Neighboring gene RNA binding motif protein 15

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables monocarboxylic acid transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in monocarboxylic acid transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    monocarboxylate transporter 5
    Names
    solute carrier family 16, member 4 (monocarboxylic acid transporter 5)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051810.1 Reference ROS_Cfam_1.0

      Range
      41937081..41965734
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038669835.1 → XP_038525763.1  monocarboxylate transporter 5 isoform X2

      UniProtKB/TrEMBL
      A0A8C0K9D1
      Conserved Domains (1) summary
      cl28910
      Location:20 → 445
      MFS; Major Facilitator Superfamily

    2. XM_038669836.1 → XP_038525764.1  monocarboxylate transporter 5 isoform X3

      UniProtKB/TrEMBL
      A0A8C0K9D1
      Conserved Domains (1) summary
      cl28910
      Location:20 → 444
      MFS; Major Facilitator Superfamily

    3. XM_038669834.1 → XP_038525762.1  monocarboxylate transporter 5 isoform X1

      UniProtKB/TrEMBL
      A0A8C0K9D1, A0A8C0KA87, A0A8C0SI36, A0A8I3MJS3
      Related
      ENSCAFP00845002843.1, ENSCAFT00845003584.1
      Conserved Domains (1) summary
      cl28910
      Location:20 → 477
      MFS; Major Facilitator Superfamily

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049266.1 Alternate UMICH_Zoey_3.1

      Range
      41657195..41685844
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038479763.1 → XP_038335691.1  monocarboxylate transporter 5 isoform X2

      Conserved Domains (1) summary
      cl28910
      Location:20 → 445
      MFS; Major Facilitator Superfamily

    2. XM_038479764.1 → XP_038335692.1  monocarboxylate transporter 5 isoform X3

      Conserved Domains (1) summary
      cl28910
      Location:20 → 444
      MFS; Major Facilitator Superfamily

    3. XM_038479762.1 → XP_038335690.1  monocarboxylate transporter 5 isoform X1

      Conserved Domains (1) summary
      cl28910
      Location:20 → 477
      MFS; Major Facilitator Superfamily

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

      Range
      41628024..41656868
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038605163.1 → XP_038461091.1  monocarboxylate transporter 5 isoform X2

      Conserved Domains (1) summary
      cl28910
      Location:20 → 445
      MFS; Major Facilitator Superfamily

    2. XM_038605164.1 → XP_038461092.1  monocarboxylate transporter 5 isoform X3

      Conserved Domains (1) summary
      cl28910
      Location:20 → 444
      MFS; Major Facilitator Superfamily

    3. XM_038605162.1 → XP_038461090.1  monocarboxylate transporter 5 isoform X1

      Conserved Domains (1) summary
      cl28910
      Location:20 → 477
      MFS; Major Facilitator Superfamily

    4. XM_038605165.1 → XP_038461093.1  monocarboxylate transporter 5 isoform X4

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

      Range
      42063335..42092023
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038541034.1 → XP_038396962.1  monocarboxylate transporter 5 isoform X2

      UniProtKB/TrEMBL
      A0A8C0K9D1
      Conserved Domains (1) summary
      cl28910
      Location:20 → 445
      MFS; Major Facilitator Superfamily

    2. XM_038541035.1 → XP_038396963.1  monocarboxylate transporter 5 isoform X3

      UniProtKB/TrEMBL
      A0A8C0K9D1
      Conserved Domains (1) summary
      cl28910
      Location:20 → 444
      MFS; Major Facilitator Superfamily

    3. XM_038541033.1 → XP_038396961.1  monocarboxylate transporter 5 isoform X1

      UniProtKB/TrEMBL
      A0A8C0K9D1, A0A8C0KA87, A0A8C0SI36, A0A8I3MJS3
      Conserved Domains (1) summary
      cl28910
      Location:20 → 477
      MFS; Major Facilitator Superfamily

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      44382537..44411188
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022420341.2 → XP_022276049.1  monocarboxylate transporter 5 isoform X2

      UniProtKB/TrEMBL
      A0A8C0K9D1
      Conserved Domains (1) summary
      cl28910
      Location:20 → 445
      MFS; Major Facilitator Superfamily

    2. XM_005621794.3 → XP_005621851.1  monocarboxylate transporter 5 isoform X3

      UniProtKB/TrEMBL
      A0A8C0K9D1
      Conserved Domains (1) summary
      cl28910
      Location:20 → 444
      MFS; Major Facilitator Superfamily

    3. XM_014114752.3 → XP_013970227.1  monocarboxylate transporter 5 isoform X1

      UniProtKB/TrEMBL
      A0A8C0K9D1, A0A8C0KA87, A0A8C0SI36, A0A8I3MJS3
      Conserved Domains (1) summary
      cl28910
      Location:20 → 477
      MFS; Major Facilitator Superfamily
    Nucleotide Protein
    Heading Accession and Version

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