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    TFAP2B transcription factor AP-2 beta [ Canis lupus familiaris (dog) ]

    Gene ID: 403463, updated on 5-Mar-2024

    Summary

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    Official Symbol
    TFAP2Bprovided by VGNC
    Official Full Name
    transcription factor AP-2 betaprovided by VGNC
    Primary source
    VGNC:VGNC:47284
    See related
    Ensembl:ENSCAFG00845007336
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    AP-2B
    Orthologs
    human mouse all
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    Genomic context

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    See TFAP2B in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 12 NC_051816.1 (19041005..19071021)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 12 NC_006594.4 (18436730..18462495)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 12 NC_049233.1 (18791560..18817345)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 12 NC_049272.1 (18549889..18575642)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 12 NC_049753.1 (18654100..18679842)

    Chromosome 12 - NC_051816.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111098158 Neighboring gene transcription factor AP-2 delta Neighboring gene uncharacterized LOC119874178 Neighboring gene uncharacterized LOC102155090 Neighboring gene 40S ribosomal protein S27-like Neighboring gene uncharacterized LOC119874254

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in anatomical structure development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor AP-2-beta
    Names
    AP2-beta
    activating enhancer-binding protein 2-beta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002977.1 → NP_001002977.1  transcription factor AP-2-beta

      See identical proteins and their annotated locations for NP_001002977.1

      Status: PROVISIONAL

      Source sequence(s)
      AB101212
      UniProtKB/Swiss-Prot
      Q76HI7
      Related
      ENSCAFP00845010159.1, ENSCAFT00845013039.1
      Conserved Domains (1) summary
      pfam03299
      Location:217 → 415
      TF_AP-2; Transcription factor AP-2

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051816.1 Reference ROS_Cfam_1.0

      Range
      19041005..19071021
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038682674.1 → XP_038538602.1  transcription factor AP-2-beta isoform X1

      UniProtKB/TrEMBL
      A0A8I3MWP9, A0A8P0T7C9
      Related
      ENSCAFP00845010192.1, ENSCAFT00845013095.1
      Conserved Domains (1) summary
      pfam03299
      Location:239 → 433
      TF_AP-2; Transcription factor AP-2

    2. XM_038682676.1 → XP_038538604.1  transcription factor AP-2-beta isoform X3

      UniProtKB/TrEMBL
      A0A8I3MUL6, A0A8P0TF49
      Related
      ENSCAFP00845010103.1, ENSCAFT00845012962.1
      Conserved Domains (1) summary
      pfam03299
      Location:230 → 424
      TF_AP-2; Transcription factor AP-2

    3. XM_038682675.1 → XP_038538603.1  transcription factor AP-2-beta isoform X2

      UniProtKB/TrEMBL
      A0A8C0Q5N3
      Related
      ENSCAFP00845010248.1, ENSCAFT00845013187.1
      Conserved Domains (1) summary
      pfam03299
      Location:239 → 433
      TF_AP-2; Transcription factor AP-2

    4. XM_038682677.1 → XP_038538605.1  transcription factor AP-2-beta isoform X4

      Conserved Domains (1) summary
      pfam03299
      Location:226 → 420
      TF_AP-2; Transcription factor AP-2

    5. XM_038682678.1 → XP_038538606.1  transcription factor AP-2-beta isoform X5

      UniProtKB/TrEMBL
      A0A8C0M8D0
      Conserved Domains (1) summary
      pfam03299
      Location:212 → 406
      TF_AP-2; Transcription factor AP-2

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049272.1 Alternate UMICH_Zoey_3.1

      Range
      18549889..18575642
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049753.1 Alternate UNSW_CanFamBas_1.0

      Range
      18654100..18679842
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049233.1 Alternate UU_Cfam_GSD_1.0

      Range
      18791560..18817345
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006594.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      18436730..18462495
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q76HI7.2 GenPept UniProtKB/Swiss-Prot:Q76HI7

    Gene LinkOut

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