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    MED13L mediator complex subunit 13L [ Canis lupus familiaris (dog) ]

    Gene ID: 477496, updated on 5-Mar-2024

    Summary

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    Official Symbol
    MED13Lprovided by VGNC
    Official Full Name
    mediator complex subunit 13Lprovided by VGNC
    Primary source
    VGNC:VGNC:43123
    See related
    Ensembl:ENSCAFG00845025123
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    THRAP2
    Orthologs
    human mouse all
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    Genomic context

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    See MED13L in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    35
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 26 NC_051830.1 (13028568..13324202, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 26 NC_006608.4 (12764292..13059638, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 26 NC_049247.1 (13102596..13397898, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 26 NC_049286.1 (12990722..13286061, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 26 NC_049767.1 (13073281..13365481, complement)

    Chromosome 26 - NC_051830.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119866091 Neighboring gene uncharacterized LOC119866092 Neighboring gene uncharacterized LOC111092685 Neighboring gene uncharacterized LOC102152770

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mediator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mediator of RNA polymerase II transcription subunit 13-like
    Names
    mediator complex subunit 13 like
    thyroid hormone receptor associated protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051830.1 Reference ROS_Cfam_1.0

      Range
      13028568..13324202 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038436807.1 → XP_038292735.1  mediator of RNA polymerase II transcription subunit 13-like isoform X2

      UniProtKB/TrEMBL
      A0A8C0PII4
      Conserved Domains (3) summary
      pfam06333
      Location:1795 → 2210
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam11597
      Location:11 → 222
      Med13_N; Mediator complex subunit 13 N-terminal
      pfam18296
      Location:1414 → 1759
      MID_MedPIWI; MID domain of medPIWI

    2. XM_038436806.1 → XP_038292734.1  mediator of RNA polymerase II transcription subunit 13-like isoform X1

      UniProtKB/TrEMBL
      A0A8C0PII4
      Conserved Domains (3) summary
      pfam06333
      Location:1796 → 2211
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam11597
      Location:11 → 222
      Med13_N; Mediator complex subunit 13 N-terminal
      pfam18296
      Location:1415 → 1760
      MID_MedPIWI; MID domain of medPIWI

    3. XM_038436808.1 → XP_038292736.1  mediator of RNA polymerase II transcription subunit 13-like isoform X3

      UniProtKB/TrEMBL
      A0A8C0KXN6, A0A8C0PII4, A0A8C0TW71, A0A8I3PPH0
      Related
      ENSCAFP00845035000.1, ENSCAFT00845044668.1
      Conserved Domains (3) summary
      pfam06333
      Location:1796 → 2199
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam11597
      Location:11 → 222
      Med13_N; Mediator complex subunit 13 N-terminal
      pfam18296
      Location:1415 → 1760
      MID_MedPIWI; MID domain of medPIWI

    4. XM_038436810.1 → XP_038292738.1  mediator of RNA polymerase II transcription subunit 13-like isoform X4

      UniProtKB/TrEMBL
      A0A8C0TT25
      Conserved Domains (2) summary
      pfam06333
      Location:1697 → 2112
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam18296
      Location:1316 → 1661
      MID_MedPIWI; MID domain of medPIWI

    5. XM_038436811.1 → XP_038292739.1  mediator of RNA polymerase II transcription subunit 13-like isoform X5

      UniProtKB/TrEMBL
      A0A8C0TSY0, A0A8P0NBE4
      Conserved Domains (2) summary
      pfam06333
      Location:1680 → 2095
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam18296
      Location:1299 → 1644
      MID_MedPIWI; MID domain of medPIWI

    RNA

    1. XR_005302362.1 RNA Sequence

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049286.1 Alternate UMICH_Zoey_3.1

      Range
      12990722..13286061 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038511713.1 → XP_038367641.1  mediator of RNA polymerase II transcription subunit 13-like isoform X2

      Conserved Domains (3) summary
      pfam06333
      Location:1795 → 2210
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam11597
      Location:11 → 222
      Med13_N; Mediator complex subunit 13 N-terminal
      pfam18296
      Location:1414 → 1759
      MID_MedPIWI; MID domain of medPIWI

    2. XM_038511712.1 → XP_038367640.1  mediator of RNA polymerase II transcription subunit 13-like isoform X1

      Conserved Domains (3) summary
      pfam06333
      Location:1796 → 2211
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam11597
      Location:11 → 222
      Med13_N; Mediator complex subunit 13 N-terminal
      pfam18296
      Location:1415 → 1760
      MID_MedPIWI; MID domain of medPIWI

    3. XM_038511714.1 → XP_038367642.1  mediator of RNA polymerase II transcription subunit 13-like isoform X3

      Conserved Domains (3) summary
      pfam06333
      Location:1796 → 2199
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam11597
      Location:11 → 222
      Med13_N; Mediator complex subunit 13 N-terminal
      pfam18296
      Location:1415 → 1760
      MID_MedPIWI; MID domain of medPIWI

    4. XM_038511715.1 → XP_038367643.1  mediator of RNA polymerase II transcription subunit 13-like isoform X4

      Conserved Domains (2) summary
      pfam06333
      Location:1697 → 2112
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam18296
      Location:1316 → 1661
      MID_MedPIWI; MID domain of medPIWI

    5. XM_038511716.1 → XP_038367644.1  mediator of RNA polymerase II transcription subunit 13-like isoform X5

      Conserved Domains (2) summary
      pfam06333
      Location:1680 → 2095
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam18296
      Location:1299 → 1644
      MID_MedPIWI; MID domain of medPIWI

    RNA

    1. XR_005345445.1 RNA Sequence

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049767.1 Alternate UNSW_CanFamBas_1.0

      Range
      13073281..13365481 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038639394.1 → XP_038495322.1  mediator of RNA polymerase II transcription subunit 13-like isoform X2

    2. XM_038639393.1 → XP_038495321.1  mediator of RNA polymerase II transcription subunit 13-like isoform X1

    3. XM_038639395.1 → XP_038495323.1  mediator of RNA polymerase II transcription subunit 13-like isoform X3

    4. XM_038639396.1 → XP_038495324.1  mediator of RNA polymerase II transcription subunit 13-like isoform X4

    5. XM_038639397.1 → XP_038495325.1  mediator of RNA polymerase II transcription subunit 13-like isoform X5

    RNA

    1. XR_005413030.1 RNA Sequence

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049247.1 Alternate UU_Cfam_GSD_1.0

      Range
      13102596..13397898 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038575206.1 → XP_038431134.1  mediator of RNA polymerase II transcription subunit 13-like isoform X2

      UniProtKB/TrEMBL
      A0A8C0PII4
      Conserved Domains (3) summary
      pfam06333
      Location:1795 → 2210
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam11597
      Location:11 → 222
      Med13_N; Mediator complex subunit 13 N-terminal
      pfam18296
      Location:1414 → 1759
      MID_MedPIWI; MID domain of medPIWI

    2. XM_038575205.1 → XP_038431133.1  mediator of RNA polymerase II transcription subunit 13-like isoform X1

      UniProtKB/TrEMBL
      A0A8C0PII4
      Conserved Domains (3) summary
      pfam06333
      Location:1796 → 2211
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam11597
      Location:11 → 222
      Med13_N; Mediator complex subunit 13 N-terminal
      pfam18296
      Location:1415 → 1760
      MID_MedPIWI; MID domain of medPIWI

    3. XM_038575207.1 → XP_038431135.1  mediator of RNA polymerase II transcription subunit 13-like isoform X3

      UniProtKB/TrEMBL
      A0A8C0KXN6, A0A8C0PII4, A0A8C0TW71, A0A8I3PPH0
      Conserved Domains (3) summary
      pfam06333
      Location:1796 → 2199
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam11597
      Location:11 → 222
      Med13_N; Mediator complex subunit 13 N-terminal
      pfam18296
      Location:1415 → 1760
      MID_MedPIWI; MID domain of medPIWI

    4. XM_038575208.1 → XP_038431136.1  mediator of RNA polymerase II transcription subunit 13-like isoform X4

      UniProtKB/TrEMBL
      A0A8C0TT25
      Conserved Domains (2) summary
      pfam06333
      Location:1697 → 2112
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam18296
      Location:1316 → 1661
      MID_MedPIWI; MID domain of medPIWI

    5. XM_038575209.1 → XP_038431137.1  mediator of RNA polymerase II transcription subunit 13-like isoform X5

      UniProtKB/TrEMBL
      A0A8C0TSY0, A0A8P0NBE4
      Conserved Domains (2) summary
      pfam06333
      Location:1680 → 2095
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam18296
      Location:1299 → 1644
      MID_MedPIWI; MID domain of medPIWI

    RNA

    1. XR_005379205.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006608.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      12764292..13059638 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038459321.1 → XP_038315249.1  mediator of RNA polymerase II transcription subunit 13-like isoform X2

      UniProtKB/TrEMBL
      A0A8C0PII4
      Conserved Domains (3) summary
      pfam06333
      Location:1795 → 2210
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam11597
      Location:11 → 222
      Med13_N; Mediator complex subunit 13 N-terminal
      pfam18296
      Location:1414 → 1759
      MID_MedPIWI; MID domain of medPIWI

    2. XM_038459320.1 → XP_038315248.1  mediator of RNA polymerase II transcription subunit 13-like isoform X1

      UniProtKB/TrEMBL
      A0A8C0PII4
      Conserved Domains (3) summary
      pfam06333
      Location:1796 → 2211
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam11597
      Location:11 → 222
      Med13_N; Mediator complex subunit 13 N-terminal
      pfam18296
      Location:1415 → 1760
      MID_MedPIWI; MID domain of medPIWI

    3. XM_038459322.1 → XP_038315250.1  mediator of RNA polymerase II transcription subunit 13-like isoform X3

      UniProtKB/TrEMBL
      A0A8C0KXN6, A0A8C0PII4, A0A8C0TW71, A0A8I3PPH0
      Conserved Domains (3) summary
      pfam06333
      Location:1796 → 2199
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam11597
      Location:11 → 222
      Med13_N; Mediator complex subunit 13 N-terminal
      pfam18296
      Location:1415 → 1760
      MID_MedPIWI; MID domain of medPIWI

    4. XM_038459323.1 → XP_038315251.1  mediator of RNA polymerase II transcription subunit 13-like isoform X4

      UniProtKB/TrEMBL
      A0A8C0TT25
      Conserved Domains (2) summary
      pfam06333
      Location:1697 → 2112
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam18296
      Location:1316 → 1661
      MID_MedPIWI; MID domain of medPIWI

    5. XM_038459324.1 → XP_038315252.1  mediator of RNA polymerase II transcription subunit 13-like isoform X5

      UniProtKB/TrEMBL
      A0A8C0TSY0, A0A8P0NBE4
      Conserved Domains (2) summary
      pfam06333
      Location:1680 → 2095
      Med13_C; Mediator complex subunit 13 C-terminal
      pfam18296
      Location:1299 → 1644
      MID_MedPIWI; MID domain of medPIWI

    RNA

    1. XR_005315063.1 RNA Sequence

    Nucleotide Protein
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