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    ATXN7L3 ataxin 7 like 3 [ Canis lupus familiaris (dog) ]

    Gene ID: 612754, updated on 5-Mar-2024

    Summary

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    Official Symbol
    ATXN7L3provided by VGNC
    Official Full Name
    ataxin 7 like 3provided by VGNC
    Primary source
    VGNC:VGNC:38306
    See related
    Ensembl:ENSCAFG00845009030
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See ATXN7L3 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (19892368..19900027)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (18587656..18595315)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (19073756..19081419)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (18746042..18753699)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (18929263..18936920)

    Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 4 member 1 Neighboring gene upstream binding transcription factor Neighboring gene transmembrane and ubiquitin like domain containing 2 Neighboring gene ankyrin repeat and SOCS box containing 16

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of DUBm complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of SAGA complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ataxin-7-like protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051813.1 Reference ROS_Cfam_1.0

      Range
      19892368..19900027
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038676273.1 → XP_038532201.1  ataxin-7-like protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KCS9
      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:234 → 263
      SCA7; zinc-binding domain

    2. XM_038676277.1 → XP_038532205.1  ataxin-7-like protein 3 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KCS9, A0A8I3N7I7
      Related
      ENSCAFP00845012386.1, ENSCAFT00845015918.1
      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:215 → 244
      SCA7; zinc-binding domain

    3. XM_038676276.1 → XP_038532204.1  ataxin-7-like protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A8C0RBG1
      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:227 → 256
      SCA7; zinc-binding domain

    4. XM_038676278.1 → XP_038532206.1  ataxin-7-like protein 3 isoform X4

      UniProtKB/TrEMBL
      A0A8C0KCS9
      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:208 → 237
      SCA7; zinc-binding domain

    5. XM_038676274.1 → XP_038532202.1  ataxin-7-like protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KCS9
      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:234 → 263
      SCA7; zinc-binding domain

    6. XM_038676275.1 → XP_038532203.1  ataxin-7-like protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KCS9
      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:234 → 263
      SCA7; zinc-binding domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049269.1 Alternate UMICH_Zoey_3.1

      Range
      18746042..18753699
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038485353.1 → XP_038341281.1  ataxin-7-like protein 3 isoform X1

      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:234 → 263
      SCA7; zinc-binding domain

    2. XM_038485357.1 → XP_038341285.1  ataxin-7-like protein 3 isoform X3

      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:215 → 244
      SCA7; zinc-binding domain

    3. XM_038485356.1 → XP_038341284.1  ataxin-7-like protein 3 isoform X2

      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:227 → 256
      SCA7; zinc-binding domain

    4. XM_038485358.1 → XP_038341286.1  ataxin-7-like protein 3 isoform X4

      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:208 → 237
      SCA7; zinc-binding domain

    5. XM_038485354.1 → XP_038341282.1  ataxin-7-like protein 3 isoform X1

      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:234 → 263
      SCA7; zinc-binding domain

    6. XM_038485355.1 → XP_038341283.1  ataxin-7-like protein 3 isoform X1

      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:234 → 263
      SCA7; zinc-binding domain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

      Range
      18929263..18936920
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038611088.1 → XP_038467016.1  ataxin-7-like protein 3 isoform X1

      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:234 → 263
      SCA7; zinc-binding domain

    2. XM_038611092.1 → XP_038467020.1  ataxin-7-like protein 3 isoform X3

      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:215 → 244
      SCA7; zinc-binding domain

    3. XM_038611091.1 → XP_038467019.1  ataxin-7-like protein 3 isoform X2

      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:227 → 256
      SCA7; zinc-binding domain

    4. XM_038611094.1 → XP_038467022.1  ataxin-7-like protein 3 isoform X4

      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:208 → 237
      SCA7; zinc-binding domain

    5. XM_038611089.1 → XP_038467017.1  ataxin-7-like protein 3 isoform X1

      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:234 → 263
      SCA7; zinc-binding domain

    6. XM_038611090.1 → XP_038467018.1  ataxin-7-like protein 3 isoform X1

      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:234 → 263
      SCA7; zinc-binding domain

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

      Range
      19073756..19081419
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038547120.1 → XP_038403048.1  ataxin-7-like protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KCS9
      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:234 → 263
      SCA7; zinc-binding domain

    2. XM_038547124.1 → XP_038403052.1  ataxin-7-like protein 3 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KCS9, A0A8C0YZW6, A0A8P0NG50
      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:215 → 244
      SCA7; zinc-binding domain

    3. XM_038547123.1 → XP_038403051.1  ataxin-7-like protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A8C0RBG1
      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:227 → 256
      SCA7; zinc-binding domain

    4. XM_038547125.1 → XP_038403053.1  ataxin-7-like protein 3 isoform X4

      UniProtKB/TrEMBL
      A0A8C0KCS9
      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:208 → 237
      SCA7; zinc-binding domain

    5. XM_038547121.1 → XP_038403049.1  ataxin-7-like protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KCS9
      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:234 → 263
      SCA7; zinc-binding domain

    6. XM_038547122.1 → XP_038403050.1  ataxin-7-like protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KCS9
      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:234 → 263
      SCA7; zinc-binding domain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      18587656..18595315
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005624401.4 → XP_005624458.1  ataxin-7-like protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KCS9
      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:234 → 263
      SCA7; zinc-binding domain

    2. XM_843534.6 → XP_848627.1  ataxin-7-like protein 3 isoform X3

      See identical proteins and their annotated locations for XP_848627.1

      UniProtKB/TrEMBL
      A0A8C0KCS9, A0A8C0YZW6, A0A8P0NG50
      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:215 → 244
      SCA7; zinc-binding domain

    3. XM_005624402.4 → XP_005624459.1  ataxin-7-like protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A8C0RBG1
      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:227 → 256
      SCA7; zinc-binding domain

    4. XM_851575.6 → XP_856668.3  ataxin-7-like protein 3 isoform X4

      See identical proteins and their annotated locations for XP_856668.3

      UniProtKB/TrEMBL
      A0A8C0KCS9
      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:208 → 237
      SCA7; zinc-binding domain

    5. XM_022422900.2 → XP_022278608.1  ataxin-7-like protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KCS9
      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:234 → 263
      SCA7; zinc-binding domain

    6. XM_022422901.2 → XP_022278609.1  ataxin-7-like protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KCS9
      Conserved Domains (2) summary
      pfam08209
      Location:80 → 112
      Sgf11; Sgf11 (transcriptional regulation protein)
      pfam08313
      Location:234 → 263
      SCA7; zinc-binding domain
    Nucleotide Protein
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