U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ALKBH6 alkB homolog 6 [ Canis lupus familiaris (dog) ]

    Gene ID: 612622, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ALKBH6provided by VGNC
    Official Full Name
    alkB homolog 6provided by VGNC
    Primary source
    VGNC:VGNC:37806
    See related
    Ensembl:ENSCAFG00845000513
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ALKBH6 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (117274284..117279932)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (116076834..116082479)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (117517091..117522745)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (116838319..116843973)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (116461885..116467539)

    Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene THAP domain containing 8 Neighboring gene uncharacterized LOC111090541 Neighboring gene CAP-Gly domain containing linker protein 3 Neighboring gene spectrin repeat containing nuclear envelope family member 4 Neighboring gene IgGFc-binding protein-like Neighboring gene succinate dehydrogenase complex assembly factor 1 Neighboring gene IgGFc-binding protein-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    alpha-ketoglutarate-dependent dioxygenase alkB homolog 6
    Names
    alkB, alkylation repair homolog 6
    XP_013971417.3
    XP_013971443.1
    XP_022260032.2
    XP_022260039.2
    XP_022260041.2
    XP_022260043.2
    XP_038324382.1
    XP_038324383.1
    XP_038324384.1
    XP_038324385.1
    XP_038324386.1
    XP_038324387.1
    XP_038324388.1
    XP_038385161.1
    XP_038385162.1
    XP_038385163.1
    XP_038385164.1
    XP_038385165.1
    XP_038385166.1
    XP_038385167.1
    XP_038449424.1
    XP_038449425.1
    XP_038449426.1
    XP_038449427.1
    XP_038449428.1
    XP_038449429.1
    XP_038449430.1
    XP_038513266.1
    XP_038513267.1
    XP_038513268.1
    XP_038513269.1
    XP_038513270.1
    XP_038513271.1
    XP_038513272.1
    XP_855448.2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051805.1 Reference ROS_Cfam_1.0

      Range
      117274284..117279932
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038657343.1 → XP_038513271.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X5

      UniProtKB/TrEMBL
      A0A8C0T6L0
      Related
      ENSCAFP00845000636.1, ENSCAFT00845000846.1
      Conserved Domains (1) summary
      cl21496
      Location:46 → 247
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    2. XM_038657344.1 → XP_038513272.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X6

    3. XM_038657340.1 → XP_038513268.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X2

      UniProtKB/TrEMBL
      A0A8C0T6L0
      Conserved Domains (1) summary
      cl21496
      Location:65 → 288
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    4. XM_038657338.1 → XP_038513266.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1

      UniProtKB/TrEMBL
      A0A8C0RFL4
      Conserved Domains (2) summary
      PRK12323
      Location:223 → 319
      PRK12323; DNA polymerase III subunit gamma/tau
      cl21496
      Location:65 → 180
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    5. XM_038657339.1 → XP_038513267.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X2

      UniProtKB/TrEMBL
      A0A8C0T6L0
      Conserved Domains (1) summary
      cl21496
      Location:65 → 288
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    6. XM_038657341.1 → XP_038513269.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X3

      UniProtKB/TrEMBL
      A0A8C0T6L0
      Conserved Domains (1) summary
      cl21496
      Location:65 → 273
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    7. XM_038657342.1 → XP_038513270.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X4

      UniProtKB/TrEMBL
      A0A8C0T6L0, A0A8I3MGG4, A0A8P0SBY4
      Related
      ENSCAFP00845000631.1, ENSCAFT00845000839.1
      Conserved Domains (1) summary
      cl21496
      Location:65 → 266
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049261.1 Alternate UMICH_Zoey_3.1

      Range
      116838319..116843973
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038468459.1 → XP_038324387.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X5

    2. XM_038468460.1 → XP_038324388.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X6

    3. XM_038468456.1 → XP_038324384.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X2

    4. XM_038468454.1 → XP_038324382.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1

      Conserved Domains (2) summary
      PRK12323
      Location:223 → 319
      PRK12323; DNA polymerase III subunit gamma/tau
      cl21496
      Location:65 → 180
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    5. XM_038468455.1 → XP_038324383.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X2

    6. XM_038468457.1 → XP_038324385.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X3

    7. XM_038468458.1 → XP_038324386.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X4

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

      Range
      116461885..116467539
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038593501.1 → XP_038449429.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X5

    2. XM_038593502.1 → XP_038449430.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X6

    3. XM_038593498.1 → XP_038449426.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X2

    4. XM_038593496.1 → XP_038449424.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1

      Conserved Domains (2) summary
      PRK12323
      Location:223 → 319
      PRK12323; DNA polymerase III subunit gamma/tau
      cl21496
      Location:65 → 180
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    5. XM_038593497.1 → XP_038449425.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X2

    6. XM_038593499.1 → XP_038449427.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X3

    7. XM_038593500.1 → XP_038449428.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X4

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

      Range
      117517091..117522745
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038529238.1 → XP_038385166.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X5

      UniProtKB/TrEMBL
      A0A8C0T6L0
      Conserved Domains (1) summary
      cl21496
      Location:46 → 247
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    2. XM_038529239.1 → XP_038385167.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X6

    3. XM_038529235.1 → XP_038385163.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X2

      UniProtKB/TrEMBL
      A0A8C0T6L0
      Conserved Domains (1) summary
      cl21496
      Location:65 → 288
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    4. XM_038529233.1 → XP_038385161.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1

      UniProtKB/TrEMBL
      A0A8C0RFL4
      Conserved Domains (2) summary
      PRK12323
      Location:223 → 319
      PRK12323; DNA polymerase III subunit gamma/tau
      cl21496
      Location:65 → 180
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    5. XM_038529234.1 → XP_038385162.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X2

      UniProtKB/TrEMBL
      A0A8C0T6L0
      Conserved Domains (1) summary
      cl21496
      Location:65 → 288
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    6. XM_038529236.1 → XP_038385164.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X3

      UniProtKB/TrEMBL
      A0A8C0T6L0
      Conserved Domains (1) summary
      cl21496
      Location:65 → 273
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    7. XM_038529237.1 → XP_038385165.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X4

      UniProtKB/TrEMBL
      A0A8C0T6L0, A0A8I3MGG4, A0A8P0SBY4
      Conserved Domains (1) summary
      cl21496
      Location:65 → 266
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      116076834..116082479
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_850355.6 → XP_855448.2  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X5

      UniProtKB/TrEMBL
      A0A8C0T6L0
      Conserved Domains (1) summary
      cl21496
      Location:46 → 247
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    2. XM_014115968.3 → XP_013971443.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X6

    3. XM_022404331.2 → XP_022260039.2  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X2

      UniProtKB/TrEMBL
      A0A8C0T6L0
      Conserved Domains (1) summary
      cl21496
      Location:65 → 288
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    4. XM_022404324.2 → XP_022260032.2  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1

      UniProtKB/TrEMBL
      A0A8C0RFL4
      Conserved Domains (2) summary
      PRK12323
      Location:223 → 319
      PRK12323; DNA polymerase III subunit gamma/tau
      cl21496
      Location:65 → 180
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    5. XM_014115942.3 → XP_013971417.3  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X2

      UniProtKB/TrEMBL
      A0A8C0T6L0
      Conserved Domains (1) summary
      cl21496
      Location:65 → 288
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    6. XM_022404333.2 → XP_022260041.2  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X3

      UniProtKB/TrEMBL
      A0A8C0T6L0
      Conserved Domains (1) summary
      cl21496
      Location:65 → 273
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    7. XM_022404335.2 → XP_022260043.2  alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X4

      UniProtKB/TrEMBL
      A0A8C0T6L0, A0A8I3MGG4, A0A8P0SBY4
      Conserved Domains (1) summary
      cl21496
      Location:65 → 266
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Miscellaneous