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    EIF5A eukaryotic translation initiation factor 5A [ Canis lupus familiaris (dog) ]

    Gene ID: 489468, updated on 5-Mar-2024

    Summary

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    Gene symbol
    EIF5A
    Gene description
    eukaryotic translation initiation factor 5A
    See related
    Ensembl:ENSCAFG00845020953
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See EIF5A in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 5 NC_051809.1 (32373168..32378059)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 5 NC_006587.4 (32405817..32410703)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 5 NC_049226.1 (32474419..32479302)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 5 NC_049265.1 (32338605..32343491)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 5 NC_049746.1 (32297394..32302267)

    Chromosome 5 - NC_051809.1Genomic Context describing neighboring genes Neighboring gene Y-box binding protein 2 Neighboring gene uncharacterized LOC111095872 Neighboring gene G protein pathway suppressor 2 Neighboring gene neuralized E3 ubiquitin protein ligase 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ribosome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation elongation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of translational elongation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of translational termination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    eukaryotic translation initiation factor 5A-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051809.1 Reference ROS_Cfam_1.0

      Range
      32373168..32378059
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038665388.1 → XP_038521316.1  eukaryotic translation initiation factor 5A-1

      UniProtKB/TrEMBL
      A0A8C0K6S7, A0A8C0NA08, A0A8C0RIV2, A0A8I3PFB8, A0A8I3PLK3
      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    2. XM_038665384.1 → XP_038521312.1  eukaryotic translation initiation factor 5A-1

      UniProtKB/TrEMBL
      A0A8C0K6S7, A0A8C0NA08, A0A8C0RIV2, A0A8I3PFB8, A0A8I3PLK3
      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    3. XM_038665385.1 → XP_038521313.1  eukaryotic translation initiation factor 5A-1

      UniProtKB/TrEMBL
      A0A8C0K6S7, A0A8C0NA08, A0A8C0RIV2, A0A8I3PFB8, A0A8I3PLK3
      Related
      ENSCAFP00845029025.1, ENSCAFT00845037066.1
      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    4. XM_038665387.1 → XP_038521315.1  eukaryotic translation initiation factor 5A-1

      UniProtKB/TrEMBL
      A0A8C0K6S7, A0A8C0NA08, A0A8C0RIV2, A0A8I3PFB8, A0A8I3PLK3
      Related
      ENSCAFP00845028971.1, ENSCAFT00845037001.1
      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    5. XM_038665386.1 → XP_038521314.1  eukaryotic translation initiation factor 5A-1

      UniProtKB/TrEMBL
      A0A8C0K6S7, A0A8C0NA08, A0A8C0RIV2, A0A8I3PFB8, A0A8I3PLK3
      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049265.1 Alternate UMICH_Zoey_3.1

      Range
      32338605..32343491
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038475500.1 → XP_038331428.1  eukaryotic translation initiation factor 5A-1

      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    2. XM_038475495.1 → XP_038331423.1  eukaryotic translation initiation factor 5A-1

      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    3. XM_038475496.1 → XP_038331424.1  eukaryotic translation initiation factor 5A-1

      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    4. XM_038475499.1 → XP_038331427.1  eukaryotic translation initiation factor 5A-1

      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    5. XM_038475497.1 → XP_038331425.1  eukaryotic translation initiation factor 5A-1

      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049746.1 Alternate UNSW_CanFamBas_1.0

      Range
      32297394..32302267
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038600847.1 → XP_038456775.1  eukaryotic translation initiation factor 5A-1

      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    2. XM_038600843.1 → XP_038456771.1  eukaryotic translation initiation factor 5A-1

      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    3. XM_038600844.1 → XP_038456772.1  eukaryotic translation initiation factor 5A-1

      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    4. XM_038600846.1 → XP_038456774.1  eukaryotic translation initiation factor 5A-1

      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    5. XM_038600845.1 → XP_038456773.1  eukaryotic translation initiation factor 5A-1

      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049226.1 Alternate UU_Cfam_GSD_1.0

      Range
      32474419..32479302
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038536665.1 → XP_038392593.1  eukaryotic translation initiation factor 5A-1

      UniProtKB/TrEMBL
      A0A8C0K6S7, A0A8C0NA08, A0A8C0RIV2, A0A8I3PFB8, A0A8I3PLK3
      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    2. XM_038536661.1 → XP_038392589.1  eukaryotic translation initiation factor 5A-1

      UniProtKB/TrEMBL
      A0A8C0K6S7, A0A8C0NA08, A0A8C0RIV2, A0A8I3PFB8, A0A8I3PLK3
      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    3. XM_038536662.1 → XP_038392590.1  eukaryotic translation initiation factor 5A-1

      UniProtKB/TrEMBL
      A0A8C0K6S7, A0A8C0NA08, A0A8C0RIV2, A0A8I3PFB8, A0A8I3PLK3
      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    4. XM_038536664.1 → XP_038392592.1  eukaryotic translation initiation factor 5A-1

      UniProtKB/TrEMBL
      A0A8C0K6S7, A0A8C0NA08, A0A8C0RIV2, A0A8I3PFB8, A0A8I3PLK3
      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    5. XM_038536663.1 → XP_038392591.1  eukaryotic translation initiation factor 5A-1

      UniProtKB/TrEMBL
      A0A8C0K6S7, A0A8C0NA08, A0A8C0RIV2, A0A8I3PFB8, A0A8I3PLK3
      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006587.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      32405817..32410703
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005619972.4 → XP_005620029.1  eukaryotic translation initiation factor 5A-1

      See identical proteins and their annotated locations for XP_005620029.1

      UniProtKB/TrEMBL
      A0A8C0K6S7, A0A8C0NA08, A0A8C0RIV2, A0A8I3PFB8, A0A8I3PLK3
      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    2. XM_843935.6 → XP_849028.1  eukaryotic translation initiation factor 5A-1

      See identical proteins and their annotated locations for XP_849028.1

      UniProtKB/TrEMBL
      A0A8C0K6S7, A0A8C0NA08, A0A8C0RIV2, A0A8I3PFB8, A0A8I3PLK3
      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    3. XM_005619970.4 → XP_005620027.1  eukaryotic translation initiation factor 5A-1

      See identical proteins and their annotated locations for XP_005620027.1

      UniProtKB/TrEMBL
      A0A8C0K6S7, A0A8C0NA08, A0A8C0RIV2, A0A8I3PFB8, A0A8I3PLK3
      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    4. XM_038514988.1 → XP_038370916.1  eukaryotic translation initiation factor 5A-1

      UniProtKB/TrEMBL
      A0A8C0K6S7, A0A8C0NA08, A0A8C0RIV2, A0A8I3PFB8, A0A8I3PLK3
      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional

    5. XM_005619971.4 → XP_005620028.1  eukaryotic translation initiation factor 5A-1

      See identical proteins and their annotated locations for XP_005620028.1

      UniProtKB/TrEMBL
      A0A8C0K6S7, A0A8C0NA08, A0A8C0RIV2, A0A8I3PFB8, A0A8I3PLK3
      Conserved Domains (1) summary
      cl30809
      Location:1 → 150
      PLN03107; eukaryotic translation initiation factor 5A; Provisional
    Nucleotide Protein
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